Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq446 96.9 3e-15 seq46 84.2 2e-11 >seq446 Length=229981 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || || || || || ||| | ||||| ||| | | Sbjct 154437 ATGCAAATTTTCGTCAAGACTCTCACTGGAAAGACGATCACGTTGGAAGTCGAATCATCA 154496 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| || |||||||||||||| || |||||||| || Sbjct 154497 GACACCATTGATAACGTCAAGTCGAAA-ATTCAAGACAAAGAAGGCATTCCTCCCGACCA 154555 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||| || || || || || || || ||| | | | || || || || Sbjct 154556 GCAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAA 154615 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||||||||||||||| || |||||| Sbjct 154616 CATTCAAAAGGAATCCACTCTACAC 154640 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || || || ||||| || | ||||| ||| | | Sbjct 154665 ATGCAGATTTTCGTCAAGACCTTGACGGGAAAGACTATCACATTGGAAGTCGAATCATCA 154724 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || || |||||||| || || || || || ||||| || Sbjct 154725 GATACCATTGACAATGTGAAGAGCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCAG 154784 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || || ||||| ||| | | | || ||||| ||| Sbjct 154785 CAGCGATTGATCTTTGCTGGTAAGCAACTGGAAGATGGTCGCACTCTTTCTGATTACAAC 154844 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || || ||||||||| | || | ||||| ||| Sbjct 154845 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGCGGTGGC 154892 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || || || || || || || | | Sbjct 154209 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACGATCACCCTTGAGGTGGAGTCTTCT 154268 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||| || || || ||||| || || Sbjct 154269 GATACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 154328 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||||||||| || |||||||| ||||| | | | | || || || ||| Sbjct 154329 CAGCGTTTGATCTTTGCTGGAAAACAGCTCGAGGACGGCCGCACCCTATCCGACTACAAC 154388 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 || || || ||||| || || ||| Sbjct 154389 ATCCAGAAAGAATCCACTCTTCAC 154412 >seq46 Length=531280 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || ||||| || || || ||||| || || || ||||||| | || | Sbjct 30214 AAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAAT 30273 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||| ||||| || || || || ||||| || || ||| |||||||| Sbjct 30274 GTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTGATCTTT 30333 Query 24839 GCCGGGAAACAGCTGGAGGAT 24859 ||||| || ||||| || ||| Sbjct 30334 GCCGGAAAGCAGCTTGAAGAT 30354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894563191200