Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq379 127 2e-24 seq446 98.7 1e-15 seq46 96.9 3e-15 >seq379 Length=249056 Score = 127 bits (140), Expect = 2e-24 Identities = 341/517 (66%), Gaps = 11/517 (2%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || || || | | || ||||| | Sbjct 107676 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGGCAAGAGAGATGTTCTC 107735 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || || || |||||| | || || |||| ||| | ||| | || | || Sbjct 107736 CATGAAATCAAAGGGGTTGGTGGCATTGTAGTACTTCTTGTTGCCAAGAGCAACCAAGAG 107795 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||||||||||| |||||| ||| || |||||| || ||||| | Sbjct 107796 ACGGTCAGCAACGAACTCAATGTACTGGCACATCAACTTCGAGTTCATTCCGAGCAAAG- 107854 Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | | || || || | || || ||||| | |||||| | || || || | ||| Sbjct 107855 CGCAGGGAAGAGCGTCGGTCAAGAACTCTTGTTCAATGGCAACGGCGTCAACAATGATGT 107914 Query 120590 CGAGCATA---GTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACG 120646 | ||| || ||| || |||| | | || | | || || ||| | Sbjct 107915 CTTCAATAACCTTGGGGCTAGGACGGTTGT-TGAGGTGGG-----AGAAGAGCAAGCAGG 107968 Query 120647 CAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGG 120706 ||||||| ||||| || |||||||| || || || ||||||||| || |||| ||| | Sbjct 107969 CAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATAAGCTCGTTGGAGAAGGTCAAGCCAG 108028 Query 120707 GCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGC 120766 |||| | || | |||| | |||| || | |||||| ||| || ||||| | | Sbjct 108029 GCATCAAACCACGCTTCTTCAACCAGAAGATAGAGGCAAAAGAGCCAGAGAAGAAGATAC 108088 Query 120767 CCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCC 120826 |||| ||| || || ||||| | ||||| || || || | | |||| ||||| Sbjct 108089 CCTCAACGGCAGCGAATGCGACAAGGCGCTGAGCAAAGGTGGACTCCTTGTCCGAGATCC 108148 Query 120827 ACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 | || ||||| |||||||| ||||| | ||| || Sbjct 108149 AGCGCAGAGCCCAGTCGGCCTTCTTGCGAATGCAGGG 108185 >seq446 Length=229981 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| |||||||| || ||||| ||| | ||| |||||||||||| || || Sbjct 154405 GTGGATTCTTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCGTCCTCGAGCTGTTTTCCA 154346 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || | ||||||||||| |||||||| || |||||||| |||||| |||| Sbjct 154345 GCAAAGATCAAACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGGATCTTGGACTTG 154286 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || || | | |||||| || | ||||| || || || || ||||| Sbjct 154285 ACATTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGATCGTCTTTCCAGTGAGAGTC 154226 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 154225 TTGACGAAGATTTGCAT 154209 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTG 133516 |||| ||||| || || || || ||||| ||| | ||| | | | || || || || Sbjct 154639 TGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCA-TCTTCAAGTTG 154581 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || ||| |||| | ||||||||||||||||| |||||||| ||||| ||| || Sbjct 154580 CTTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATGCCTTCTTTGTC-TTGAATTT 154522 Query 133577 TTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | | ||||| | |||| ||||| | | || || || | |||| || || || | Sbjct 154521 TCGACTTGACGTTATCAATGGTGTCTGATGATTCGACTTCCAACGTGATCGTCTTTCCAG 154462 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || |||||||| ||||| Sbjct 154461 TGAGAGTCTTGACGAAAATTTGCAT 154437 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| |||||||| || || ||| | || | ||||||||||| ||||| ||||| ||||| Sbjct 154081 GTCTTCGAGCTGTTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTT 154022 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||| ||||| | || | || || | | |||||| || | ||||| Sbjct 154021 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCCACCTCAAGGGTGAT 153962 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || || || || || || || ||||||||| Sbjct 153961 GGTCTTACCAGTAAGGGTCTTGACAAAGATCTGCATG 153925 >seq46 Length=531280 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || |||||||| || || | || || |||||||||||||| ||||| || |||||| Sbjct 30353 TCTTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTG 30294 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||||| || ||| || |||| ||||| | Sbjct 30293 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATG 30234 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || || |||||| |||||| Sbjct 30233 GTCTTACCCGTGAGGGTCTTGACGAAA--CTGCAT 30201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417536909600