Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq446 188 8e-43 seq46 114 1e-20 seq445 98.7 1e-15 >seq446 Length=229981 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || || ||||| || || |||||||| ||||| | Sbjct 154209 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACGATCACCCTTGAGGTGGAGTCTTCT 154268 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| | || || || ||||||||||| || ||||| |||||| Sbjct 154269 GATACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAG 154328 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || |||||||| || || |||||||| | || |||||| | ||||| || Sbjct 154329 CAGCGTTTGATCTTTGCTGGAAAACAGCTCGAGGACGGCCGCACCCTATCCGACTACAAC 154388 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||||||||| || ||| | ||||| || ||||| Sbjct 154389 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGG 154435 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| || || || ||||| || || | || || || ||| Sbjct 154437 ATGCAAATTTTCGTCAAGACTCTCACTGGAAAGACGATCACGTTGGAAGTCGAATCATCA 154496 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | |||||||| ||||| || || |||||||| |||||| Sbjct 154497 GACACCATTGATAACGTCAAGTCGAAAATTCAAGACAAAGAAGGCATTCCTCCCGACCAG 154556 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | ||||| |||||||||||||| || |||| || || || | ||||| || Sbjct 154557 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 154616 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||||||||| || || ||| | ||||| || ||||| Sbjct 154617 ATTCAAAAGGAATCCACTCTACACCTTGTCCTCCGTCTCCGTGGTGG 154663 Score = 152 bits (168), Expect = 6e-32 Identities = 143/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||||||||| ||||| || ||||| || || |||||||| ||||| Sbjct 153923 ATCATGCAGATCTTTGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTGGAGTCT 153982 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| ||| | || | ||| | || ||||||||||||||||| |||||||| ||| Sbjct 153983 TCTGATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGAC 154042 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||| | || || ||||| || || ||||| || | ||| ||||| | ||||| Sbjct 154043 CAGCAGCGTTTGATCTTCGCTGGAAAACAGCTCGAAGACGGTCGCACCCTTTCTGACTAC 154102 Query 27583 AA 27584 || Sbjct 154103 AA 154104 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || || |||||||| || | || || || ||| Sbjct 154665 ATGCAGATTTTCGTCAAGACCTTGACGGGAAAGACTATCACATTGGAAGTCGAATCATCA 154724 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| ||||| ||||| || || |||||||| || || || |||||| Sbjct 154725 GATACCATTGACAATGTGAAGAGCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCAG 154784 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || ||||||||||||||||| || |||| ||| || || | || || || Sbjct 154785 CAGCGATTGATCTTTGCTGGTAAGCAACTGGAAGATGGTCGCACTCTTTCTGATTACAAC 154844 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| ||||| | || | ||||| |||||||| Sbjct 154845 ATCCAGAAGGAGTCCACCCTTCACTTGGTGCTCCGTCTCCGCGGTGG 154891 >seq46 Length=531280 Score = 114 bits (126), Expect = 1e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| || || || ||||| ||||| || | ||| Sbjct 30208 TTCGTCAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCATC 30267 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| || || || |||||||||||||| Sbjct 30268 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 30327 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||| || ||||| || || |||| || || || | ||||| || |||| ||| Sbjct 30328 ATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAAG 30387 Query 27595 G 27595 | Sbjct 30388 G 30388 >seq445 Length=1169376 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||||||| | || || || || ||||| ||||| Sbjct 378659 GACAAGGAGGGTATCCCCCCCGACCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAA 378600 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | ||||| || |||| ||||| ||||||||||| | ||| | Sbjct 378599 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTC 378540 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 378539 CGCCTCCGTGGTGG 378526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306550404800