Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq446 109 3e-19 seq445 91.5 9e-14 >seq446 Length=229981 Score = 109 bits (120), Expect = 3e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || ||| || | ||||| | |||||| || || ||| |||||| || ||||| ||||| Sbjct 154895 GTTGCCACCGCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATC 154836 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 ||||| || || | ||||| ||||| ||||| ||||| || || ||||| ||||| || Sbjct 154835 AGAAAGAGTGCGACCATCTTCCAGTTGCTTACCAGCAAAGATCAATCGCTGCTGGTCGGG 154776 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCT 34654 || | |||||||| ||| ||| ||| | || || | ||| || ||| | Sbjct 154775 TGGGATACCCTCCTTATCTTGGAT-TTTGCTCTTCACATTGTCAATGGTATCTGATGATT 154717 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||||| || || || || || || || || || || ||||||||||| Sbjct 154716 CGACTTCCAATGTGATAGTCTTTCCCGTCAAGGTCTTGACGAAAATCTGCAT 154665 Score = 104 bits (114), Expect = 1e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||| |||||||||||||| || || ||||| || || | ||||||||||| Sbjct 154639 TGTAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGGCCATCTTCAAGTTGC 154580 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 ||||| || || || || ||||| ||||| || || | || || |||||| ||| ||| Sbjct 154579 TTACCAGCGAAAATCAATCGCTGCTGGTCGGGAGGAATGCCTTCTTTGTCT-TGAATTTT 154521 Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| || ||| |||||| || ||||||| || ||||| || || || Sbjct 154520 CGACTTGACGTTATCAATGGTGTCTGATGATTCGACTTCCAACGTGATCGTCTTTCCAGT 154461 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || || || ||||| ||||| Sbjct 154460 GAGAGTCTTGACGAAAATTTGCAT 154437 >seq445 Length=1169376 Score = 91.5 bits (100), Expect = 9e-14 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || |||||| |||||| || ||||| || || || || || || ||||||| Sbjct 378544 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCG 378603 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTG 34615 || || || ||||| || || |||||||| ||||| || || | ||||||||||||| Sbjct 378604 AGCTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCTG 378661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727528685820