Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq446 114 9e-21 seq46 93.3 3e-14 >seq446 Length=229981 Score = 114 bits (126), Expect = 9e-21 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || || ||||| ||||| |||||||| | ||||| || || | Sbjct 154437 ATGCAAATTTTCGTCAAGACTCTCACTGGAAAGACGATCACGTTGGAAGTCGAATCATCA 154496 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || |||||| ||||||||||| | || || || || Sbjct 154497 GACACCATTGATAACGTCAAGTCGAAAATTCAAGACAAAGAAGGCATTCCTCCCGACCAG 154556 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || || || || || ||||| ||||| | |||||| | ||| |||||| Sbjct 154557 CAGCGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAAC 154616 Query 23791 ATACAAAAAGAGTCCACATTACA 23813 || ||||| || ||||| |||| Sbjct 154617 ATTCAAAAGGAATCCACTCTACA 154639 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | |||||||| || ||||| | ||||| || || | Sbjct 154665 ATGCAGATTTTCGTCAAGACCTTGACGGGAAAGACTATCACATTGGAAGTCGAATCATCA 154724 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | || | ||||| || || || ||| | || || || || Sbjct 154725 GATACCATTGACAATGTGAAGA-GCAAAATCCAAGATAAGGAGGGTATCCCACCCGACCA 154783 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| || || ||||| || || ||||||||||| | |||||| | |||||||| Sbjct 154784 GCAGCGATTGATCTTTGCTGGTAAGCAACTGGAAGATGGTCGCACTCTTTCTGATTACAA 154843 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 154844 CATCCAGAAGGAGTCCAC 154861 >seq46 Length=531280 Score = 93.3 bits (102), Expect = 3e-14 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||| |||||| || ||||||||||| || || ||||| ||||| || || ||| | Sbjct 30201 ATGCAG--TTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCC 30258 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || ||| | || || || || Sbjct 30259 GACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCA 30317 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || |||||||| || || || ||||| | |||||| | ||| ||||| Sbjct 30318 GCAGCGTCTGATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAA 30377 Query 23790 CATACAAAA 23798 ||| || || Sbjct 30378 CATCCAGAA 30386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007375474320