Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20verruculosus_20[genbank_20GCA_5F001305275.1_202015-10- 01] 540 sequences; 37,629,238 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq446 168 2e-36 seq46 149 2e-30 >seq446 Length=229981 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || |||||||| ||||| |||||||| | || || ||| |||||| Sbjct 154440 CAAATTTTCGTCAAGACTCTCACTGGAAAGACGATCACGTTGGAAGTCGAATCATCAGAC 154499 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| || ||||| ||||||||||| || ||||| |||||||| Sbjct 154500 ACCATTGATAACGTCAAGTCGAAAATTCAAGACAAAGAAGGCATTCCTCCCGACCAGCAG 154559 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||| || || || || |||||||| | |||||| |||| || ||| | Sbjct 154560 CGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGCCGCACTCTTTCCGACTACAACATT 154619 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || || || ||||| Sbjct 154620 CAAAAGGAATCCACTCTACACCTTGT 154645 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || |||||||| ||||| ||||||||||| |||||||| || || Sbjct 154212 CAAATCTTCGTCAAGACTCTCACTGGAAAGACGATCACCCTTGAGGTGGAGTCTTCTGAT 154271 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| || ||||| || || |||||||| |||||||| Sbjct 154272 ACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCTCCTGACCAGCAG 154331 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || |||||||||||||| || || | || || |||| || ||| || Sbjct 154332 CGTTTGATCTTTGCTGGAAAACAGCTCGAGGACGGCCGCACCCTATCCGACTACAACATC 154391 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || || || ||||| Sbjct 154392 CAGAAAGAATCCACTCTTCACCTTGT 154417 Score = 131 bits (144), Expect = 4e-25 Identities = 135/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || || || || || || |||||||| |||||||| || || Sbjct 153929 CAGATCTTTGTCAAGACCCTTACTGGTAAGACCATCACCCTTGAGGTGGAGTCTTCTGAT 153988 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || || ||||| |||||||| Sbjct 153989 ACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAG 154048 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || | |||||||| ||||||||||||||||| || | || ||| | || || ||| Sbjct 154049 CGTTTGATCTTCGCTGGAAAACAGCTCGAAGACGGTCGCACCCTTTCTGACTACAAC 154105 >seq46 Length=531280 Score = 149 bits (164), Expect = 2e-30 Identities = 141/180 (78%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 |||||| || || ||||| || || || |||||||||||||| || ||| |||||||| Sbjct 30207 TTTCGTCAAGACCCTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACCAT 30266 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || ||||| || |||||||| || || Sbjct 30267 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 30326 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| |||||||| ||||| |||||||| | ||||| |||| || ||| |||| || Sbjct 30327 GATCTTTGCCGGAAAGCAGCTTGAAGATGGCCGCACTCTCTCCGACTACAACATCCAGAA 30386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203722871684760