Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20wortmannii_20[genbank_20GCA_5F001939245.1_202017-01- 09] 1,191 sequences; 38,588,669 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq531 104 2e-17 >seq531 Length=1308275 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || |||||||| | | ||||| |||| |||| || ||||| | ||||| || || Sbjct 1216199 CCACCACGCAGGCGGAGAACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCAGAG 1216140 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || ||| |||| |||| ||||||||| ||||| |||| || ||||| || | || Sbjct 1216139 AGAGTGCGTCCGTCTTCCAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGGTCAGGAGGA 1216080 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||||| || ||| | ||||| || | | |||||| || || || Sbjct 1216079 ATGCCTTCTTTATCTTGGATTTTCGACTTGACGTTGTCGATTGTGTCTGAAGATTCAACT 1216020 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || ||||| |||||||| || ||||||||||| Sbjct 1216019 TCCAATGTGATGGTCTTGCCGGTGAGAGTTTTGACGAAAATTTGCAT 1215973 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 42879 GTCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATC 42938 || ||| || || |||| | |||||| || | |||| |||||| || | ||||| || Sbjct 1216431 GTTGCCACCGCGAAGTCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTC 1216372 Query 42939 GGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGC 42998 ||||| ||| || | || |||| ||| ||||| ||||| || | || ||||| || | Sbjct 1216371 GGACAGTGTTCGACCATCTTCCAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGG 1216312 Query 42999 CGGCACACCTTCTTTTTCGCTGATCAA-CTCTTTGACTCTGCCAACTGTGTCGCCAGCCT 43057 || | ||| || || || |||| ||||| || || | | |||||| | | Sbjct 1216311 GGGGATACCCTCCTTGTCTTGGATCTTGCTCTTC-ACGTTGTCGATTGTGTCTGACGATT 1216253 Query 43058 CGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || || | ||| || || ||||| || || || || |||||||||||||| Sbjct 1216252 CAACCTCGAGCGTGATTGTCTTTCCAGTCAGGGTCTTGACAAAAATTTGCAT 1216201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381364064301078