Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20wortmannii_20[genbank_20GCA_5F001939245.1_202017-01- 09] 1,191 sequences; 38,588,669 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq531 134 1e-26 seq276 82.4 7e-11 >seq531 Length=1308275 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | ||||| || |||||||| | ||||| || || || Sbjct 1215973 ATGCAAATTTTCGTCAAAACTCTCACCGGCAAGACCATCACATTGGAAGTTGAATCTTCA 1216032 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| |||||| || |||||||| ||||| ||||||||| Sbjct 1216033 GACACAATCGACAACGTCAAGTCGAAAATCCAAGATAAAGAAGGCATTCCTCCTGACCAA 1216092 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || ||||| ||||||||| | ||||| | |||||| | || ||||| Sbjct 1216093 CAACGTCTGATCTTTGCTGGCAAACAACTGGAAGACGGACGCACTCTCTCTGACTACAAC 1216152 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||||||||| || || || || || Sbjct 1216153 ATCCAAAAAGAATCCACTCTCCACTTGGTTCT 1216184 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||| || || | ||||| |||| || || ||||| Sbjct 1216201 ATGCAAATTTTTGTCAAGACCCTGACTGGAAAGACAATCACGCTCGAGGTTGAATCGTCA 1216260 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || ||||||||| Sbjct 1216261 GACACAATCGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCTGACCAA 1216320 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||| ||||| ||||| ||| | ||||||| ||| || || ||| ||||| Sbjct 1216321 CAACGTCTTATCTTTGCTGGCAAGCAACTGGAAGATGGTCGAACACTGTCCGACTACAAC 1216380 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || ||||| || || || ||||| Sbjct 1216381 ATCCAGAAGGAGTCCACTCTTCACTTGGTGCT 1216412 Score = 98.7 bits (108), Expect = 9e-16 Identities = 148/206 (72%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| | ||||| ||||| || Sbjct 1215745 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCTTGGAAGTCGAGTCTTCC 1215804 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || ||| | || | ||| ||||| ||||| ||||| |||||| Sbjct 1215805 GACACCATCGA--CAATGTCAAGTCCAAGATTCAG-GACAAGGAAGGCATTCCCCCTGAC 1215861 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || || || || || || | ||||| | |||||| | ||| ||| Sbjct 1215862 CAACAGCGTTTGATCTTCGCTGGAAAGCAGCTGGAAGACGGCCGCACTCTTTCCGACTAC 1215921 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || || || || ||||| || || || Sbjct 1215922 AACATCCAGAAGGAATCTACCCTCCA 1215947 >seq276 Length=969159 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | || || || ||||||| | || || ||||| || ||||| ||| Sbjct 347687 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 347628 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || ||| ||||| ||||| || || || ||||||||||| Sbjct 347627 GA--CAATGTCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCTCCAGACCAACAGCGCC 347570 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || || ||||| || || | || |||| |||||| | |||| ||||| ||||| | Sbjct 347569 TGATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTAGCGACTACAACATTCAGA 347510 Query 25186 A 25186 | Sbjct 347509 A 347509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433321710108665