Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20wortmannii_20[genbank_20GCA_5F001939245.1_202017-01- 09] 1,191 sequences; 38,588,669 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq531 132 4e-26 seq553 102 7e-17 seq276 86.0 5e-12 >seq531 Length=1308275 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||| | ||||| || || |||| | ||||| ||| | | Sbjct 1215973 ATGCAAATTTTCGTCAAAACTCTCACCGGCAAGACCATCACATTGGAAGTTGAATCTTCA 1216032 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| ||||| ||||| || || || ||||| || || ||| Sbjct 1216033 GACACAATCGACAACGTCAAGTCGAAAATCCAAGATAAAGAAGGCATTCCTCCTGACCAA 1216092 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| |||||||| | || || ||||| |||| || |||||| Sbjct 1216093 CAACGTCTGATCTTTGCTGGCAAACAACTGGAAGACGGACGCACTCTCTCTGACTACAAC 1216152 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || |||||||||||||| | || || ||| | || |||| || ||| Sbjct 1216153 ATCCAAAAAGAATCCACTCTCCACTTGGTTCTCCGCCTGCGTGGTGGT 1216200 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || || | || || || || |||| || || || ||| | | Sbjct 1216201 ATGCAAATTTTTGTCAAGACCCTGACTGGAAAGACAATCACGCTCGAGGTTGAATCGTCA 1216260 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || ||||||||||||||||| || || || ||| Sbjct 1216261 GACACAATCGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCTGACCAA 1216320 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| ||||| || | || ||| || || | ||||| |||||| Sbjct 1216321 CAACGTCTTATCTTTGCTGGCAAGCAACTGGAAGATGGTCGAACACTGTCCGACTACAAC 1216380 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||||| | || || || | ||| | ||||| || Sbjct 1216381 ATCCAGAAGGAGTCCACTCTTCACTTGGTGCTCCGACTTCGCGGTGG 1216427 Score = 100 bits (110), Expect = 2e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || |||||||||| || || || || Sbjct 1215462 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 1215521 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || |||||||| || || || ||||| ||| Sbjct 1215522 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAA 1215581 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | ||||| |||||| | || || |||||| Sbjct 1215582 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACCCTTTCTGACTACAAC 1215641 Query 22399 ATTCA 22403 ||||| Sbjct 1215642 ATTCA 1215646 >seq553 Length=351347 Score = 102 bits (112), Expect = 7e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| || || ||||| ||||||||||| || || |||||||| ||| | || Sbjct 5337 AGACAAGGAGGGAATCCCCCCCGACCAACAACGTCTAATCTTCGCCGGCAAGCAGCTCGA 5278 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 || ||||||| | || || |||||||| ||||| || || ||| | || || || | Sbjct 5277 AGACGGCCGCACCCTTTCGGACTACAACATCCAAAAGGAGTCGACCCTCCACTTGGTGCT 5218 Query 22431 GCGATTGCGCGGAGGT 22446 ||| |||| || ||| Sbjct 5217 GCGTCTGCGTGGTGGT 5202 >seq276 Length=969159 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || || || || |||| ||||| || || || |||| ||| | Sbjct 347688 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 347629 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || |||||||| || || || || || ||||| || || Sbjct 347628 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGAATCCCTCCAGACCAACAGCGCCT 347569 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | |||||| |||||| | ||| ||||||||||| || Sbjct 347568 GATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTAGCGACTACAACATTCAGAA 347509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419721907516915