Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20wortmannii_20[genbank_20GCA_5F001939245.1_202017-01- 09] 1,191 sequences; 38,588,669 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq531 98.7 6e-15 seq276 87.8 1e-11 >seq531 Length=1308275 Score = 98.7 bits (108), Expect = 6e-15 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| ||||| || |||||||| || ||||||||||| ||||||||||| ||||| || Sbjct 1216127 TCTTCCAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGGTCAGGAGGAATGCCTTCTTTA 1216068 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||| || || ||||| || || || || | | | || || ||| || || Sbjct 1216067 TCTTGGATTTTCGACTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCCAA-TGTGAT 1216009 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||||||||| || ||||||||||| Sbjct 1216008 GGTCTTGCCGGTGAGAGTTTTGACGAAAATTTG 1215976 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || ||||| || ||||| || || ||| ||| || | || || || | ||||| Sbjct 1215965 CGGAGACGAAGGACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTG 1215906 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||||| || ||||||||||| || || | ||| ||||| ||||| ||||| ||| Sbjct 1215905 CGGCCGTCTTCCAGCTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCAGGGGGAATGCCT 1215846 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 |||||||| |||||||| |||||| || || || || | | | | || ||| Sbjct 1215845 TCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCGACTTCCAA- 1215787 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || || || ||||| ||||| || || Sbjct 1215786 GGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTG 1215748 Score = 89.7 bits (98), Expect = 3e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| |||||||||||||| ||||| || || || ||||| Sbjct 1216356 ATCTTCCAGTTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGGGGGATACCCTCCTT 1216297 Query 480677 GTCTTGAATCTT 480688 |||||| ||||| Sbjct 1216296 GTCTTGGATCTT 1216285 >seq276 Length=969159 Score = 87.8 bits (96), Expect = 1e-11 Identities = 122/170 (72%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 ||||| | | ||| ||||| |||||||| || || || || || ||||| || ||||| Sbjct 347530 AGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCTGGAGGG 347589 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT 480725 |||||||||||||| || ||||| |||||| || || || || | | Sbjct 347590 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAGGACTCGACC 347649 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTGGAACGA 480775 |||||||| || || || || ||||| ||||| |||||| | | |||||| Sbjct 347650 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAACTAT-GAACGA 347698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268128112231268