Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Talaromyces_20wortmannii_20[genbank_20GCA_5F001939245.1_202017-01- 09] 1,191 sequences; 38,588,669 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq531 127 1e-24 seq276 86.0 4e-12 >seq531 Length=1308275 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| ||||| || || || ||||| | |||||||| || | Sbjct 1215973 ATGCAAATTTTCGTCAAAACTCTCACCGGCAAGACCATCACATTGGAAGTTGAATCTTCA 1216032 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||||| || |||||||| | || || || ||| Sbjct 1216033 GACACAATCGACAACGTCAAGTCGAAAATCCAAGATAAAGAAGGCATTCCTCCTGACCAA 1216092 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| ||||||||||||||||||| ||||||| | || |||||| Sbjct 1216093 CAACGTCTGATCTTTGCTGGCAAACAACTGGAAGACGGACGCACTCTCTCTGACTACAAC 1216152 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || |||||||| ||||| | || || ||| Sbjct 1216153 ATCCAAAAAGAATCCACTCTCCACTTGGTT 1216182 Score = 98.7 bits (108), Expect = 7e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| | ||||| || || | Sbjct 1215745 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCTTGGAAGTCGAGTCTTCC 1215804 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | || ||||| ||||| | || || || || Sbjct 1215805 GACACCATCGACAATGTCAAGTCCAAGA-TTCAGGACAAGGAAGGCATTCCCCCTGACCA 1215863 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||||| || || || || || || |||||||||| |||||| | ||| ||||| Sbjct 1215864 ACAGCGTTTGATCTTCGCTGGAAAGCAGCTGGAAGACGGCCGCACTCTTTCCGACTACAA 1215923 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || || || Sbjct 1215924 CATCCAGAAGGAATCTAC 1215941 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || ||||| || ||||| || ||||| ||||| ||||| || | Sbjct 1216201 ATGCAAATTTTTGTCAAGACCCTGACTGGAAAGACAATCACGCTCGAGGTTGAATCGTCA 1216260 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || ||| | || || || ||| Sbjct 1216261 GACACAATCGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGTATCCCCCCTGACCAA 1216320 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| ||||| ||||||||||| | || || | ||| |||||| Sbjct 1216321 CAACGTCTTATCTTTGCTGGCAAGCAACTGGAAGATGGTCGAACACTGTCCGACTACAAC 1216380 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 1216381 ATCCAGAAGGAGTCCAC 1216397 Score = 86.0 bits (94), Expect = 4e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||||||||| || || |||||||| || || || ||| | Sbjct 1215462 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCC 1215521 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| ||||| | || || || ||| Sbjct 1215522 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAA 1215581 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || || ||||| || || || |||| ||||| | || |||||| Sbjct 1215582 CAGCGCCTGATTTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACCCTTTCTGACTACAAC 1215641 Query 23791 ATACA 23795 || || Sbjct 1215642 ATTCA 1215646 >seq276 Length=969159 Score = 86.0 bits (94), Expect = 4e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678 |||||| || ||||||||||| || || ||||| || || || || ||| | ||||| | Sbjct 347688 TTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 347629 Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737 || ||| | || | || || ||||| ||||| | || ||||| |||||||| Sbjct 347628 CGACAATGTCAAGTC-CAAGATCCAGGACAAGGAAGGAATCCCTCCAGACCAACAGCGCC 347570 Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797 | || || ||||| || || || || || | |||||| | |||| |||||||| || | Sbjct 347569 TGATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTAGCGACTACAACATTCAGA 347510 Query 23798 A 23798 | Sbjct 347509 A 347509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338004693685028