Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 8e-27
>seq2
Length=4789688
Score = 136 bits (150), Expect = 8e-27
Identities = 318/469 (68%), Gaps = 8/469 (2%)
Strand=Plus/Minus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
||||| |||||||||| |||| | ||| || || || | || ||||| ||
Sbjct 2859887 TTTGCTCAGCGTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTT- 2859829
Query 230233 TGCGCC-ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGA 230291
||| | ||||| |||||| ||| ||| |||||||||| ||| | || |||||
Sbjct 2859828 TGCTTCGATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGA 2859769
Query 230292 GTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAG-CTTATGTATTCAAAGC 230350
| | ||| ||| || |||||||| || || | | || | || ||| || | |
Sbjct 2859768 GCTGATCTCTCGTGATGAGGGTCTGCA-CACCGACTTTGCTTGTCTGCTGTTCTCCCACC 2859710
Query 230351 TCCAGAACAAGC-TACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAAC 230409
|| | || | || || |||| ||| | | ||||| || || || || | | |
Sbjct 2859709 TCAACCACCGCCCTAGCAAG-GAGATTGTCCAGAACATCATCACCGACGCCGTCGCGATC 2859651
Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCG-CCTTATTGGCATGAACGCTGAACT 230468
|| |||||||| | || ||| | || ||| ||| ||||||||||||| | ||
Sbjct 2859650 GAGCAGGAGTTCCTGACGGATGCTCTGCCC-GTCAACCTGCTTGGCATGAACGCCAAGCT 2859592
Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528
||| | ||||||||||| ||||| || ||||| || | || || ||||| || ||||
Sbjct 2859591 CATGTGCCAGTACATCGAGTTCGTCGCTGACCGACTTCTCGTGGCTCTTGGCAACAAGAA 2859532
Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588
|||||| | | || ||||| | || ||||| ||| ||||| || |||||
Sbjct 2859531 GTACTACAACGCCACCAATCCCTTCGACTTCATGGACAACATCTCGCTGTCCGGCAAGAC 2859472
Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||||||||||| ||||||||| ||||||| |||| | | ||||| |||
Sbjct 2859471 CAACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGTCATG 2859423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823552738790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |