Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 168 8e-37 >seq1 Length=6618042 Score = 168 bits (186), Expect = 8e-37 Identities = 485/740 (66%), Gaps = 6/740 (1%) Strand=Plus/Plus Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069 ||| || |||| ||| || || ||||| ||||| || ||| |||| ||||| || Sbjct 2615670 CCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTCCAGAGAGCGTAGAA 2615729 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 ||||| | | |||| ||| || || || ||||| |||||| | ||| | | Sbjct 2615730 GAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGATCCAAGAAGTCGAA 2615789 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 |||||||| ||||| || |||| ||| || | | | | ||||| || ||||||||||| Sbjct 2615790 GATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTTCCTCC 2615849 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 ||| || | |||||| || ||||| || | || | | ||| || | ||| || ||||| Sbjct 2615850 CTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGGACAATTCCGTTGGA 2615909 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309 | |||||||| || ||||| ||| || |||| || ||| || ||||| Sbjct 2615910 AGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGGTGGATGTTGAGACC 2615969 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 || || || || | || ||||| | || || || | || || || || ||||| Sbjct 2615970 AATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTGTCGTAAATACCCTC 2616029 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429 || || || ||| |||||| | || || ||| | | || | || ||| || Sbjct 2616030 AATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCTGCGGCTGAGGAGTACC 2616089 Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489 || || || | ||| |||||||| || || || | || | || | || |||||||| Sbjct 2616090 GGCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGGACATCAGGTTGTACGT 2616149 Query 54490 CTCGATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGT 54548 ||| || | || || || || | || ||||| || || |||||||| | ||||| Sbjct 2616150 CTCAATGACCTTCTCAATGTCATCACCG-TGGATTCCAACAGCAACACGCATAATCATGT 2616208 Query 54549 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTT 54608 |||| || | ||| | | |||| || || |||||||| || |||| || | Sbjct 2616209 GCTGGGGACGTTCCGCAACCTTGCCATTGATCCGAAGCAAGTATGAGCGCTCCAGGGTCT 2616268 Query 54609 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTAT 54668 | || || ||||| | || ||||| || || || | || | ||||| | || | Sbjct 2616269 TGAATCCGAAATATTGATAGTTGAAGTCACGGTCATACACGATGGCGGAGTTCAATTCGT 2616328 Query 54669 CCTTATATTTGTTAACTACATC-CATGGTAATACTT-GAAATAATCGGAGAATGTTTCCC 54726 || || ||| |||| || || ||| | | ||| || || ||||||| | | || Sbjct 2616329 CCGCATGTTTCATAACGACCTCATATGTT--TCCTTCGATATCATCGGAGCGGGCTGGCC 2616386 Query 54727 ATTTTTAGGATTGACATAGT 54746 || || || |||||||||| Sbjct 2616387 GTTCTTCGGGTTGACATAGT 2616406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721355089840