Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1 168 8e-37
>seq1
Length=6618042
Score = 168 bits (186), Expect = 8e-37
Identities = 485/740 (66%), Gaps = 6/740 (1%)
Strand=Plus/Plus
Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069
||| || |||| ||| || || ||||| ||||| || ||| |||| ||||| ||
Sbjct 2615670 CCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTCCAGAGAGCGTAGAA 2615729
Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129
||||| | | |||| ||| || || || ||||| |||||| | ||| | |
Sbjct 2615730 GAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGATCCAAGAAGTCGAA 2615789
Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189
|||||||| ||||| || |||| ||| || | | | | ||||| || |||||||||||
Sbjct 2615790 GATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTTCCTCC 2615849
Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249
||| || | |||||| || ||||| || | || | | ||| || | ||| || |||||
Sbjct 2615850 CTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGGACAATTCCGTTGGA 2615909
Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 54309
| |||||||| || ||||| ||| || |||| || ||| || |||||
Sbjct 2615910 AGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGGTGGATGTTGAGACC 2615969
Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369
|| || || || | || ||||| | || || || | || || || || |||||
Sbjct 2615970 AATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTGTCGTAAATACCCTC 2616029
Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429
|| || || ||| |||||| | || || ||| | | || | || ||| ||
Sbjct 2616030 AATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCTGCGGCTGAGGAGTACC 2616089
Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489
|| || || | ||| |||||||| || || || | || | || | || ||||||||
Sbjct 2616090 GGCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGGACATCAGGTTGTACGT 2616149
Query 54490 CTCGATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGT 54548
||| || | || || || || | || ||||| || || |||||||| | |||||
Sbjct 2616150 CTCAATGACCTTCTCAATGTCATCACCG-TGGATTCCAACAGCAACACGCATAATCATGT 2616208
Query 54549 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTT 54608
|||| || | ||| | | |||| || || |||||||| || |||| || |
Sbjct 2616209 GCTGGGGACGTTCCGCAACCTTGCCATTGATCCGAAGCAAGTATGAGCGCTCCAGGGTCT 2616268
Query 54609 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTAT 54668
| || || ||||| | || ||||| || || || | || | ||||| | || |
Sbjct 2616269 TGAATCCGAAATATTGATAGTTGAAGTCACGGTCATACACGATGGCGGAGTTCAATTCGT 2616328
Query 54669 CCTTATATTTGTTAACTACATC-CATGGTAATACTT-GAAATAATCGGAGAATGTTTCCC 54726
|| || ||| |||| || || ||| | | ||| || || ||||||| | | ||
Sbjct 2616329 CCGCATGTTTCATAACGACCTCATATGTT--TCCTTCGATATCATCGGAGCGGGCTGGCC 2616386
Query 54727 ATTTTTAGGATTGACATAGT 54746
|| || || ||||||||||
Sbjct 2616387 GTTCTTCGGGTTGACATAGT 2616406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721355089840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |