Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq7 185 1e-41
>seq7
Length=1958609
Score = 185 bits (204), Expect = 1e-41
Identities = 280/396 (71%), Gaps = 2/396 (1%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
||||||||||| ||| | | || || ||||| |||||||| ||| || || ||
Sbjct 1119863 ACGTAGAACTGCGCAAAC-ATATGACACGGCGGGAGGGCCATCTTTTTCAGATCGGCGGG 1119805
Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988
|||||| ||| | | || || || | | | ||| || | | | || | | ||
Sbjct 1119804 GTTCCACGCGCTCATGATGATCCGACGGTCATAGGGCGTCTCCCTCAACTTGCGCACCAC 1119745
Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048
|||| |||||||||||||||||| ||| ||| || ||||| | ||| || ||| ||||
Sbjct 1119744 GTCCGCGAGCTGGTCCACGCCCTGGCCCGTGTAGTCCGTCTTCGCGTCGACATACTCGGC 1119685
Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108
||||||||| | ||||||||| ||||| ||||| |||||||| ||| ||| | ||||
Sbjct 1119684 CCCGAAGTGACGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCGACCTCGCGGTGCGA 1119625
Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT 146168
||| || | | | | ||||| || ||| |||||| ||||||||||||||| |||
Sbjct 1119624 CAGGCCCACGCTGTCCAGGAACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGATGCCGGC 1119565
Query 146169 CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGAC 146228
| |||||||| |||| |||| | || |||||||||||| || || | | |||
Sbjct 1119564 CTCGGAGAGCGGGACGGAGGACGTGCAGCCGGAGATGAACCAGAGGAGTTCGGCAACGAC 1119505
Query 146229 CCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264
| | |||||| | ||| ||||| | ||||||
Sbjct 1119504 GGCGCGGAGGAAGACGCGCTTCGTGGTGATCAGGGG 1119469
Score = 87.8 bits (96), Expect = 2e-12
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 145669 GTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACG 145728
|||||||| |||||||| || | |||| |||||||||||||| || |||| | |
Sbjct 1120124 GTCAGCTGCTCCTTCAGGGCATCGATATGGTCAAGGTAGACGTGCGCATCGCCCATGGTG 1120065
Query 145729 TGGATGA-AGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGA 145787
||||| | || |||||| || ||| | || |||||||| ||| | |||| || |
Sbjct 1120064 TGGATCAGCGTGCCCGGGTTC-AGGTCGGTCGCGTGGGCGAGCATATGTGTCAAAAGCGC 1120006
Query 145788 GTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAG 145844
|| ||| || ||||| || || ||||| ||||| || | || |||||||| ||
Sbjct 1120005 ATACGAGGCGATATTGAACGGGACACCCAGTCCCATATCGCAGGATCGCTGGTAGAG 1119949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076556593320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |