Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq7 185 1e-41 >seq7 Length=1958609 Score = 185 bits (204), Expect = 1e-41 Identities = 280/396 (71%), Gaps = 2/396 (1%) Strand=Plus/Minus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||||||||| ||| | | || || ||||| |||||||| ||| || || || Sbjct 1119863 ACGTAGAACTGCGCAAAC-ATATGACACGGCGGGAGGGCCATCTTTTTCAGATCGGCGGG 1119805 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||| ||| | | || || || | | | ||| || | | | || | | || Sbjct 1119804 GTTCCACGCGCTCATGATGATCCGACGGTCATAGGGCGTCTCCCTCAACTTGCGCACCAC 1119745 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 |||| |||||||||||||||||| ||| ||| || ||||| | ||| || ||| |||| Sbjct 1119744 GTCCGCGAGCTGGTCCACGCCCTGGCCCGTGTAGTCCGTCTTCGCGTCGACATACTCGGC 1119685 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 ||||||||| | ||||||||| ||||| ||||| |||||||| ||| ||| | |||| Sbjct 1119684 CCCGAAGTGACGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCGACCTCGCGGTGCGA 1119625 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT 146168 ||| || | | | | ||||| || ||| |||||| ||||||||||||||| ||| Sbjct 1119624 CAGGCCCACGCTGTCCAGGAACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGATGCCGGC 1119565 Query 146169 CGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGAC 146228 | |||||||| |||| |||| | || |||||||||||| || || | | ||| Sbjct 1119564 CTCGGAGAGCGGGACGGAGGACGTGCAGCCGGAGATGAACCAGAGGAGTTCGGCAACGAC 1119505 Query 146229 CCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 | | |||||| | ||| ||||| | |||||| Sbjct 1119504 GGCGCGGAGGAAGACGCGCTTCGTGGTGATCAGGGG 1119469 Score = 87.8 bits (96), Expect = 2e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 145669 GTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACG 145728 |||||||| |||||||| || | |||| |||||||||||||| || |||| | | Sbjct 1120124 GTCAGCTGCTCCTTCAGGGCATCGATATGGTCAAGGTAGACGTGCGCATCGCCCATGGTG 1120065 Query 145729 TGGATGA-AGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGA 145787 ||||| | || |||||| || ||| | || |||||||| ||| | |||| || | Sbjct 1120064 TGGATCAGCGTGCCCGGGTTC-AGGTCGGTCGCGTGGGCGAGCATATGTGTCAAAAGCGC 1120006 Query 145788 GTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAG 145844 || ||| || ||||| || || ||||| ||||| || | || |||||||| || Sbjct 1120005 ATACGAGGCGATATTGAACGGGACACCCAGTCCCATATCGCAGGATCGCTGGTAGAG 1119949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076556593320