Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq7 109 5e-19
seq1 84.2 2e-11
>seq7
Length=1958609
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || ||||| | ||| || | |||| || |||||||| ||||| || ||||| |
Sbjct 430708 TTCCTCCACGCAGGCGGAGGACAAGGTGCAGTGTAGACTCCTTCTGAATATTGTAGTCTG 430767
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| ||| || | ||||||||||| || || || | ||||| | |||||||||| ||
Sbjct 430768 ACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCCGGGG 430827
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| ||| || ||||| | ||| ||||| | ||
Sbjct 430828 GAATACCCTCCTTGTCCTGGATTTTCGACTTCACGTTATCGATGGTATCTGACGATTCGA 430887
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||| | |||||||||||| ||||| | || ||||| || || ||||||
Sbjct 430888 CTTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCATT 430937
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || ||||| | || || | || | |||| |||||| || ||||||||||| |
Sbjct 430936 TTCCACCACGCAGACGCAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGG 430995
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
||||| || | ||||| ||||| ||||| || | || || | ||||||||| ||
Sbjct 430996 AAAGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGG 431055
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| || || | | ||| || || | | ||||
Sbjct 431056 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCA 431115
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163
|||| ||| || ||||||||||| | || |||||
Sbjct 431116 CCTCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGAC 431152
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | ||||||| || | ||||||||||| || ||||||||||| |
Sbjct 431221 TTCCACCACGGAGACGAAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGG 431280
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | ||||||| ||||| |||||||| | || | | ||||||||| ||
Sbjct 431281 AGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGG 431340
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| || || | | ||| || || | | ||||
Sbjct 431341 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCA 431400
Query 21127 TTTCCACGGTAATGGTCTTGCCGGT 21151
|| | ||| || |||||||||||
Sbjct 431401 CCTCAAGGGTGATAGTCTTGCCGGT 431425
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
||| || || || || ||||| |||| || | |||| |||||| || || || |||||
Sbjct 430478 GTTACCACCACGGAGTCTGAGAACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTC 430537
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| || || | ||||||| ||||| |||||||| | || | | |||||||||
Sbjct 430538 GGAGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGG 430597
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
|| | || |||||||| |||||| ||||| | | ||| || ||| | |||
Sbjct 430598 TGGGATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGCTCTC 430657
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| ||||||||||| ||||| | || || || || || ||||||
Sbjct 430658 GACCTCCAGCGTAATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCATT 430709
>seq1
Length=6618042
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||||||| || | || |||||||| || ||||| || ||||
Sbjct 1741421 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAG 1741362
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||||||||| || || || | || || | |||||||||| |||
Sbjct 1741361 AGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1741302
Query 21069 ACGCCTTCCTTGTC 21082
| || ||||||||
Sbjct 1741301 ATACCCTCCTTGTC 1741288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259030172628
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