Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq7 116 3e-21
seq3 116 3e-21
seq1 96.9 3e-15
>seq7
Length=1958609
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||| | ||||||||| || ||||| ||||| || || ||||| |||||| |||||
Sbjct 430733 GTGCAGTGTAGACTCCTTCTGAATATTGTAGTCTGACAAGGTGCGGCCATCCTCCAGCTG 430792
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| |||||| |||| ||||||||||| || || || || ||||||||||| |||||
Sbjct 430793 CTTACCAGCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATTTT 430852
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||| || | ||||| |||| ||| | || || |||||
Sbjct 430853 CGACTTCACGTTATCGATGGTATCTGACGATTCGACTTCGAGGGTAATGGTCTTTCCGGT 430912
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || |||||||||||
Sbjct 430913 GAGGGTCTTGACGAAAATCTGCAT 430936
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | ||| | |||| ||||| || ||| || || || ||||| |||
Sbjct 430480 TACCACCACGGAGTCTGAGAACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGG 430539
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||||| ||||| ||||| || || ||| |||| | |||||||| || || |
Sbjct 430540 AGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTG 430599
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| || || || || | |||| ||||| | ||||||||
Sbjct 430600 GGATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGCTCTCGA 430659
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | || || ||||||||||| || || || ||||||||
Sbjct 430660 CCTCCAGCGTAATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 430708
Score = 82.4 bits (90), Expect = 7e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || ||||| || ||| | ||||| |||||||||||| || || ||| |
Sbjct 430973 CTCCTTCTGGATGTTATAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAA 431032
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
||| || |||||||| || || || || ||||||||||| || || || || |
Sbjct 431033 GATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTT 431092
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| |||||| | ||| ||||| | ||| | || |||||||| || || || ||
Sbjct 431093 GTCGATGGTGTCGCTCGACTCCACCTCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGAC 431152
>seq3
Length=4355815
Score = 116 bits (128), Expect = 3e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| |||||| |||||||||||| || |||||| ||||
Sbjct 2043493 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATA 2043552
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
||||||||||| || || || || ||||||||||| ||| || || || | |||
Sbjct 2043553 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCG 2043612
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| |||||| | |||||| |||| ||| | || || || ||||| || || || ||
Sbjct 2043613 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2043671
>seq1
Length=6618042
Score = 96.9 bits (106), Expect = 3e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||| ||||| || ||||| || || ||||||||||| | ||||| ||
Sbjct 1741407 CAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGGCCGTC 1741348
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || |||||| |||| ||||||||||| || || || || |||||||||||
Sbjct 1741347 CTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 1741288
Query 118646 TGT 118648
|||
Sbjct 1741287 TGT 1741285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830225518836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |