Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 7e-15 >seq6 Length=3125892 Score = 96.9 bits (106), Expect = 7e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 |||||| || ||||| || | ||||| || || || |||| |||||| ||||| || Sbjct 1324593 CTGTCCTCCATTCAAAATCATCATCCTCGATGAAGCAGACAGCATGACCCAGGACGCTCA 1324534 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 ||| |||||||| || || ||||| | || | | | || || || || || ||||| Sbjct 1324533 GTCTGCCCTCCGTCGCACTATGGAACAGTACAGCCGTATCACCCGGTTCTGTCTTGTGTG 1324474 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAG 254380 |||||| ||| || || |||| |||||||| ||| ||| |||||| || |||| Sbjct 1324473 CAACTATGTGACGCGAATTATCGAGCCGCTGGCGAGTCGATGCAGCAAGTTCCGCTTCAA 1324414 Query 254381 CACCCTCG 254388 |||||| Sbjct 1324413 AGCCCTCG 1324406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765945998144