Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq7 131 1e-25
seq3 95.1 1e-14
>seq7
Length=1958609
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | | ||| | |||| ||| || |||||||||||||| || |||||||||
Sbjct 430482 CCACCACGGAGTCTGAGAACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGAG 430541
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| |||| |||| || || || || || ||||| ||||| ||||| ||||| || ||
Sbjct 430542 AGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTGGG 430601
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||||||||||| || || ||| || | | |||| | ||| |||
Sbjct 430602 ATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGCTCTCGACC 430661
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| ||||| ||||| || |||||||||||||| ||||| |||||
Sbjct 430662 TCCAGCGTAATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 430708
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || |||||||||||||| ||||| |||||| || ||| | || || || ||
Sbjct 430961 GTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAAAGGGTGCGGCCATCCTCGAGCTG 431020
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || ||||| |||| ||||| ||||| || || | ||||||||||||| || ||
Sbjct 431021 CTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTT 431080
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | ||||||||||| ||| || |||||||| ||
Sbjct 431081 GGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACCTCCAGGGTGATAGTCTTGCCGGT 431140
Query 45313 CAGAGTCTTCAC 45324
|| ||||| ||
Sbjct 431141 GAGGGTCTTGAC 431152
Score = 98.7 bits (108), Expect = 8e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| ||||| |||||| || |||| |||| ||
Sbjct 431241 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGCGTGCGACCGTCCTCA 431300
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| ||||| ||||| ||||| || || | |||||||||||||
Sbjct 431301 AGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGG 431360
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| || ||||||
Sbjct 431361 ATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTG 431420
Query 45308 CCCGTCA 45314
|| ||||
Sbjct 431421 CCGGTCA 431427
>seq3
Length=4355815
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206
||||||| |||||||||||| |||| ||| | || || || || || || ||||| |
Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550
Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266
| | ||||| ||||| || || | ||||||||||||| ||| || ||| ||
Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT 2043610
Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326
| | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || |
Sbjct 2043611 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2043670
Query 45327 AG 45328
||
Sbjct 2043671 AG 2043672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075041105693
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |