Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 194 1e-44
seq7 95.1 1e-14
seq3 84.2 2e-11
>seq1
Length=6618042
Score = 194 bits (214), Expect = 1e-44
Identities = 429/642 (67%), Gaps = 6/642 (1%)
Strand=Plus/Plus
Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411
|||| || || ||||| |||| ||||||||||| || || || || | || || || |
Sbjct 2615696 TCATGAAGAGGTCCGGAGTCCAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCT 2615755
Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471
||||| |||||| | |||||| ||||| || | || | ||||| ||||| ||||
Sbjct 2615756 TGCCGTGGTTCTTGCGAAGATCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGT 2615815
Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531
| | || || || || || | ||| || || ||||| |||||||| | ||| |||||||
Sbjct 2615816 AGATAGCGAAAGCACCAGGGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGT 2615875
Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591
|| | || | ||||| || || | |||||||| | || || | | |
Sbjct 2615876 TGAAGACCCGGAGCATGGGGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGG 2615935
Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651
| || | || || | ||| | || || ||| || || || | | || || ||||
Sbjct 2615936 AGCCGGTGGCGCGGATACGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCA 2615995
Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711
||| || || ||||||||||| || ||||| |||||||| || || | |||| |
Sbjct 2615996 GCGCACAAGTCTTGAGAGTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGA 2616055
Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771
||| || || | | |||| | || ||| |||| |||||| || || || |
Sbjct 2616056 GGAAGCAGGAGGCGAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCAT 2616115
Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831
| || ||||| | ||||| || |||||||| || ||| | |||||||| || |
Sbjct 2616116 GAGTGAAGTACTTCTGGGACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCAC 2616175
Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATT---GAGGTCTCTCGACCGTGACGC 23888
|||| || || | || || ||||| ||||||| | || || | | ||| | ||
Sbjct 2616176 CGTGGATTCCAACAGCAACACGCATAATCATGTGCTGGGGACGTTCCGCAACCTT---GC 2616232
Query 23889 CGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAA 23948
| || || | || ||||| || | || || || ||||| ||||| | |||||| |
Sbjct 2616233 CATTGATCCGAAGCAAGTATGAGCGCTCCAGGGTCTTGAATCCGAAATATTGATAGTTGA 2616292
Query 23949 AGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCAT 23990
||||||| || | ||| ||||| || ||||| || |||||
Sbjct 2616293 AGTCACGGTCATACACGATGGCGGAGTTCAATTCGTCCGCAT 2616334
>seq7
Length=1958609
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| || || || || || || ||| |||| || ||| ||||
Sbjct 430936 ATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATTACCCTCGAAGTCGAATCGTCA 430877
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || || ||| ||||||||| || | || || ||||||
Sbjct 430876 GATACCATCGATAACGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 430817
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || |||||||| || ||| |||| ||
Sbjct 430816 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGA 430782
>seq3
Length=4355815
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| ||||| || || || || ||| ||||||| || || ||||| ||
Sbjct 2043671 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2043612
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || ||||||||| || | || || ||||||||||||||
Sbjct 2043611 GACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTT 2043552
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| |||||||| || ||| | || || ||| ||||||| || ||||| || ||
Sbjct 2043551 ATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 2043493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766216121360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |