Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq7 102 7e-17 >seq7 Length=1958609 Score = 102 bits (112), Expect = 7e-17 Identities = 170/237 (72%), Gaps = 9/237 (4%) Strand=Plus/Minus Query 21111 ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169 ||||| ||||| | |||| | ||||| || ||||| |||||| || || ||||| Sbjct 1119863 ACGTAGAACTG-CGCAAACATATGACACGGCGGGAGGGCCATCTTTTTCAGATCGGCGGG 1119805 Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGC-CTGTTAATTAGATCCACCA 21228 ||||||||||| ||| | ||| || || || | |||| | | | || | | ||||| Sbjct 1119804 GTTCCACGCGCTCATGATGATCCGACGGTCATAGGGCGTCTCCCTCAACTTG-CGCACCA 1119746 Query 21229 CGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCC 21287 ||| ||| ||||||||||| ||||| ||| ||||| | | || | ||||| Sbjct 1119745 CGT-CCGCGAGCTGGTCCACGCCCTGGCCCGTGTAGTCCGTCTTCGCGTCGACATACTCG 1119687 Query 21288 GCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC---CCTCGCGG 21341 ||||| || || | ||||||||| |||||||| || ||||| |||| |||||||| Sbjct 1119686 GCCCCGAAGTGACGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCGACCTCGCGG 1119630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775827953840