Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq7 102 7e-17
>seq7
Length=1958609
Score = 102 bits (112), Expect = 7e-17
Identities = 170/237 (72%), Gaps = 9/237 (4%)
Strand=Plus/Minus
Query 21111 ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169
||||| ||||| | |||| | ||||| || ||||| |||||| || || |||||
Sbjct 1119863 ACGTAGAACTG-CGCAAACATATGACACGGCGGGAGGGCCATCTTTTTCAGATCGGCGGG 1119805
Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGC-CTGTTAATTAGATCCACCA 21228
||||||||||| ||| | ||| || || || | |||| | | | || | | |||||
Sbjct 1119804 GTTCCACGCGCTCATGATGATCCGACGGTCATAGGGCGTCTCCCTCAACTTG-CGCACCA 1119746
Query 21229 CGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCC 21287
||| ||| ||||||||||| ||||| ||| ||||| | | || | |||||
Sbjct 1119745 CGT-CCGCGAGCTGGTCCACGCCCTGGCCCGTGTAGTCCGTCTTCGCGTCGACATACTCG 1119687
Query 21288 GCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC---CCTCGCGG 21341
||||| || || | ||||||||| |||||||| || ||||| |||| ||||||||
Sbjct 1119686 GCCCCGAAGTGACGCCACTGGAAGCCGTACACGGGGCCCAGGTCGCCGACCTCGCGG 1119630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775827953840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |