Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 183 4e-41
seq2 131 2e-25
>seq1
Length=6618042
Score = 183 bits (202), Expect = 4e-41
Identities = 582/896 (65%), Gaps = 6/896 (1%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|||||||| || || | ||||| | | |||||| |||| || || | || | |
Sbjct 2615611 TCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTGGGGCAGAACAGTGTC 2615670
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || || | ||| || || ||||| ||||| || ||| |||| ||||| ||
Sbjct 2615671 CAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTCCAGAGAGCGTAGAAG 2615730
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
||||| | | |||| || || || || ||||| |||||| | ||| | |
Sbjct 2615731 AGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGATCCAAGAAGTCGAAG 2615790
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
|||||||| ||||| || |||| ||| || || | | | || || || ||||||||||||
Sbjct 2615791 ATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTTCCTCCC 2615850
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | |||||| || ||||| || | || | | ||| || | ||| || |||||
Sbjct 2615851 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGGACAATTCCGTTGGAA 2615910
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220
| |||||||| || ||||| ||| || |||| || ||| || |||||
Sbjct 2615911 GATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGGTGGATGTTGAGACCA 2615970
Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280
|| || || || | || ||||| | || || || | || || || || |||||
Sbjct 2615971 ATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTGTCGTAAATACCCTCA 2616030
Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 80340
||||| || || |||||| | || || ||| | | || | || ||| ||
Sbjct 2616031 ATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCTGCGGCTGAGGAGTACCG 2616090
Query 80341 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 80400
|| || || | ||| |||||||| || || || | || | |||| || |||||||||
Sbjct 2616091 GCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGGACATCAGGTTGTACGTC 2616150
Query 80401 TCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459
||||| | || || || || | || ||||| || || |||||||| | ||||||
Sbjct 2616151 TCAATGACCTTCTCAATGTCATCACCG-TGGATTCCAACAGCAACACGCATAATCATGTG 2616209
Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519
||| || | ||| | | |||| ||| || | |||||| || |||| || ||
Sbjct 2616210 CTGGGGACGTTCCGCAACCTTGCCATTGATCCGAAGCAAGTATGAGCGCTCCAGGGTCTT 2616269
Query 80520 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 80579
|| || ||||| | || ||||| || || || | || | ||||| | || ||
Sbjct 2616270 GAATCCGAAATATTGATAGTTGAAGTCACGGTCATACACGATGGCGGAGTTCAATTCGTC 2616329
Query 80580 CTTATATTTGTTAACTACATC-CATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCA 80637
| || ||| |||| || || ||| | | ||| || || ||||||| | | ||
Sbjct 2616330 CGCATGTTTCATAACGACCTCATATGTT--TCCTTCGATATCATCGGAGCGGGCTGGCCG 2616387
Query 80638 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTT 80697
|| || || || ||||||| | | | || || || ||| | || || ||
Sbjct 2616388 TTCTTCGGGTTGACATAGTGGTACAGGTCTGAGATAACCAGGGAAAACTGCTTCTTCGTC 2616447
Query 80698 TCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
| |||||| || || || |||||||| | || || | || ||||| ||||| ||
Sbjct 2616448 TGCTTGTGCAGGTTCGACACGGCTATACGCGCAGCGAGGATTGCATAGTCTGGGTG 2616503
>seq2
Length=4789688
Score = 131 bits (144), Expect = 2e-25
Identities = 160/218 (73%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| || ||| || || ||| |||||||||||| || | | || || ||||||||
Sbjct 2859718 AACAGCAGACAAGCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 2859777
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| ||||| || ||||| || |||||||| || ||||| || || || ||||| || ||
Sbjct 2859778 AAGGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCG 2859837
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127
|| |||||||| || || || ||||| |||||||| || | || || | ||| |
Sbjct 2859838 GAGAAGAAGATGCCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGGTGGACTCC 2859897
Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165
|||| || |||||||| ||||| || ||||||||
Sbjct 2859898 TTGTCCTGAATCCACTTGATGGCCCACTCAGCCTTCTT 2859935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268503714120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |