Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2 181 2e-40
>seq2
Length=4789688
Score = 181 bits (200), Expect = 2e-40
Identities = 365/538 (68%), Gaps = 25/538 (5%)
Strand=Plus/Minus
Query 125322 AAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGG 125381
||||||||||| ||||| ||| | || || | || || || |||||| | |||
Sbjct 2859972 AAACACATGCT----AACGCG-TCG---CAGTTCCTTGCATCCGCAAGAAGGCTGAGTGG 2859921
Query 125382 GTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCC 125441
| || |||||| | ||| | |||| | | || | | || || || ||||||
Sbjct 2859920 GCCATCAAGTGGATTCAGGACAAGGAGTCCACCTTTGCTCAGCGTCTCGTTGCCTTCGCC 2859861
Query 125442 GCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGC 125501
|| || |||||||||||||| || || ||||| | ||||| ||||| ||||||||
Sbjct 2859860 GCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTTGCTTCGATCTTCTGGCTGAAGAAGCGT 2859801
Query 125502 GGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACAC 125561
|| || ||||| || || || | |||||| | || ||||| || ||||| || |||
Sbjct 2859800 GGTCTGATGCCTGGTCTCACCTTCTCCAACGAGCTGATCTCTCGTGATGAGGGTCTGCAC 2859741
Query 125562 TGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGA 125620
|||||||| ||| ||||| || || || | | | | | ||| |
Sbjct 2859740 ACCGACTTTGCTTGTCTGCTGTTCTCCCACCT----------CAACCACCGCCCTAGCAA 2859691
Query 125621 TGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGA 125680
|| | ||| ||||| | ||||| ||||| ||| || || ||||| || || ||
Sbjct 2859690 GGAGATTGTCCAGAACATCATCACCGACGCCGTCGCGATCGAGCAGGAGTTCCTGACGGA 2859631
Query 125681 ATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTT 125740
| || || |||| | || ||||||||||| |||||| |||||| ||||||| |||||
Sbjct 2859630 TGCTCTGCCCGTCAACCTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTT 2859571
Query 125741 TGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTACAACGCCAAGAA 125797
|| || || || || || || | ||||| ||||| |||||||||| ||
Sbjct 2859570 CGTCGCTGACCGACTTCT---CGTGGCTCTTGGCAACAAGAAGTACTACAACGCCACCAA 2859514
Query 125798 TCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
|||||| || |||||| || ||| || || || ||||||||||| |||||||||
Sbjct 2859513 TCCCTTCGACTTCATGGACAACATCTCGCTGTCCGGCAAGACCAACTTCTTCGAGAAG 2859456
Score = 136 bits (150), Expect = 6e-27
Identities = 207/290 (71%), Gaps = 6/290 (2%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||||||||| ||||| | || ||| | || |||
Sbjct 2860335 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCAGAGGAGATTGACCTG 2860276
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | || ||| || |||||| | || || ||
Sbjct 2860275 TCCAAGGACCTTCACGACTGGAACAACCGCCTGAACGATGATGAGCGCTACTTCATCTCC 2860216
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| | | |||||||| |||| ||||| |||||||||||||| || ||| || ||
Sbjct 2860215 CACGTCCTCGCCTTCTTCGCCGCGTCCGACGGAATCGTCAACGAAAACCTGGTGGAGCGC 2860156
Query 125199 TTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATG 125255
||| ||| | ||| | || |||| ||| ||||| || || ||||| ||||||
Sbjct 2860155 TTCAGCGGGGAG--GTCCAGGTCCCCGAGG-CTCGTTGCTTCTATGGTTTCCAGATCATG 2860099
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
|| |||||| | ||||| || | ||||| || ||||||| |||||
Sbjct 2860098 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATTGACACCTACAT 2860049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058894313080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |