Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 188 1e-43 seq6 187 4e-43 >seq5 Length=3167764 Score = 188 bits (208), Expect = 1e-43 Identities = 195/253 (77%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| || |||||| | || || |||||||| || ||||||||||| ||||| Sbjct 798511 GCTAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 798569 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| || || |||||||| ||||||||| |||| | || |||| || |||| Sbjct 798570 TCGTCGTCTTGCCCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGAC 798629 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| |||||| |||||| || || |||| ||| ||| || ||| || || Sbjct 798630 TCGTGGTGTCCTGAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 798689 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | ||| ||||||| || | || || ||||| Sbjct 798690 GCACGCCAAGCGCAAGACTGTCACTTCTCTCGATGTCGTCTACGCCCTCAAGCGGCAAGG 798749 Query 16672 CCGTAAGATTTAT 16684 |||||| |||| Sbjct 798750 ACGTAAGTCTTAT 798762 >seq6 Length=3125892 Score = 187 bits (206), Expect = 4e-43 Identities = 200/262 (76%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || | Sbjct 390756 CGCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCGGCCA 390814 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||||||||||||||| || ||||||||| | || | || |||| || |||| Sbjct 390815 TCCGTCGTCTGGCTCGTCGTGGCGGTGTCAAGCGTATTTCCGCCATGATCTACGAGGAGA 390874 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | ||| ||||||| || |||| |||| ||| || || ||| |||| Sbjct 390875 CCCGTGGTGTCCTCAAGTCCTTCCTCGAGTCCGTCATCCGTGACGCCGTCACCTACACCG 390934 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||||||| | || ||||||| || | || || || | Sbjct 390935 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTACGCCCTCAAGCGCCAGG 390994 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||| | | || ||||| || Sbjct 390995 GCCGCACCCTGTACGGTTTCGG 391016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075169827869