Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq5 188 1e-43
seq6 187 4e-43
>seq5
Length=3167764
Score = 188 bits (208), Expect = 1e-43
Identities = 195/253 (77%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| || |||||| | || || |||||||| || ||||||||||| |||||
Sbjct 798511 GCTAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 798569
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||||| || || |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 798570 TCGTCGTCTTGCCCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGAC 798629
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||||| ||| |||||| |||||| || || |||| ||| ||| || ||| || ||
Sbjct 798630 TCGTGGTGTCCTGAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 798689
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||||||||| || | ||| ||||||| || | || || |||||
Sbjct 798690 GCACGCCAAGCGCAAGACTGTCACTTCTCTCGATGTCGTCTACGCCCTCAAGCGGCAAGG 798749
Query 16672 CCGTAAGATTTAT 16684
|||||| ||||
Sbjct 798750 ACGTAAGTCTTAT 798762
>seq6
Length=3125892
Score = 187 bits (206), Expect = 4e-43
Identities = 200/262 (76%), Gaps = 2/262 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || |
Sbjct 390756 CGCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCGGCCA 390814
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||||||||||||||| || ||||||||| | || | || |||| || ||||
Sbjct 390815 TCCGTCGTCTGGCTCGTCGTGGCGGTGTCAAGCGTATTTCCGCCATGATCTACGAGGAGA 390874
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | ||| ||||||| || |||| |||| ||| || || ||| ||||
Sbjct 390875 CCCGTGGTGTCCTCAAGTCCTTCCTCGAGTCCGTCATCCGTGACGCCGTCACCTACACCG 390934
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| ||||||||| | || ||||||| || | || || || |
Sbjct 390935 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTACGCCCTCAAGCGCCAGG 390994
Query 16671 GCCGTAAGATTTATGGTTTTGG 16692
|||| | | || ||||| ||
Sbjct 390995 GCCGCACCCTGTACGGTTTCGG 391016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075169827869
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |