Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 194 4e-44 seq2 87.8 5e-12 >seq1 Length=6618042 Score = 194 bits (214), Expect = 4e-44 Identities = 463/692 (67%), Gaps = 10/692 (1%) Strand=Plus/Minus Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 |||||||| ||||| ||||| || ||| | ||| |||||||| | ||| || Sbjct 2616279 TTTCGGATTCAAGACCCTGGAGCGCTCATACTTGCTTCGGATCAATGGCAAGGTTGCGGA 2616220 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 ||| || ||||| ||| | |||||||||||| |||| ||||| | || |||| Sbjct 2616219 ACGTCCCCAGCACATGATTATGCGTGTTGCTGTTGGAATCCACGGTGATGACATTGAGAA 2616160 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAACA 363567 | ||||| || || || || | || | | ||| ||||| || || | ||||| Sbjct 2616159 GGTCATTGAGACGTACAACCTGAT--GTCCCAGAAGTACTTCACTCATGCTTCTCCAACC 2616102 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 ||| ||| || || |||| | | || ||| | | || ||||| || | | |||||| Sbjct 2616101 CTGTTCAACGCCGGTACTCCTCAGCCGCAGCTCGCCTCCTGCTTCCTCGTCGACATGAAG 2616042 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 || || ||| |||||||| | ||||| || |||| |||||| || || || |||| Sbjct 2616041 GAAGACAGCATTGAGGGTATTTACGACACTCTCAAGACTTGTGCGCTGATCTCAAAGACC 2615982 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGG 363746 || || || |||||| | |||||| | | || || || | | ||||| || Sbjct 2615981 GCTGGTGGTATTGGTCTCAACATCCACCGTATCCGCGCCACCGG-CTCCTACATCTCTGG 2615923 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || |||| || || || | || |||||||| || || || |||| ||||| || Sbjct 2615922 TACCAATGGATCTTCCAACGGAATTGTCCCCATGCTCCGGGTCTTCAACAACACTGCCAG 2615863 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 |||||||||||||| ||| |||||| || || || ||||| || || |||||| Sbjct 2615862 ATACGTCGACCAGGGAGGAAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCTTG 2615803 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||||| || || || | || || || || ||| || || || ||| | | Sbjct 2615802 GCACTCTGATATCTTCGACTTCTTGGATCTTCGCAAGAACCACGGCAAGGAAGAAGTTAG 2615743 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 || |||||||| ||||| || || ||| | | |||| || |||||||| || ||||| Sbjct 2615742 AGCTCGTGATCTCTTCTACGCTCTCTGGACTCCGGACCTCTTCATGAAGCGTGTCGAGGC 2615683 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | | ||| |||| || ||||| |||| ||| || || | ||||| | Sbjct 2615682 --GAACGGTGACTGGACACTGTTCTGCCCCAACGAGGCTCCTGGCCTCGCTGATGTGTAC 2615625 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTA 364076 || || || | | ||||| ||| | ||||| Sbjct 2615624 GGCGAGGAGTTCGAGGCTCTTTACCACAAGTA 2615593 Score = 136 bits (150), Expect = 1e-26 Identities = 669/1057 (63%), Gaps = 16/1057 (2%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||||| || |||| ||||| | || |||||| ||||| ||||| || | ||| Sbjct 2615507 GCTCAGAAACTTTGGTACGCCATTCTCGAGGCGCAGACGGAGACCGGAACCCCATTCATG 2615448 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 ||||||| ||| | |||||| | ||| ||||||| || |||| ||||| || | |||| Sbjct 2615447 CTGTACAAGGATGCTTGCAACAGGAAGAGCAACCAGAAGAACCTGGGTACTATCC-GCAG 2615389 Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289 | ||||| || || |||||||| || || | ||| || |||||| ||| || || || Sbjct 2615388 CTCCAACCTCTGCACTGAGATTATCGAGTATAGCGCCCCTGACGAGGTTGCTGTCTGCAA 2615329 Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCA-----G 364344 | | || || | || | || | || || | | || | || | | | Sbjct 2615328 CTTGGCCTCTCTTGCATTGCCTACCTTCGTCGACGCTGCCCGTGGCGAGTATGACTTTGG 2615269 Query 364345 CAT-CTTTATGACGTAACCTATCATGCTACTT-GCAATCTCGACAAGGTTATCGACAAGA 364402 || || | || || ||| | | || || |||| | ||||| | ||||| | | Sbjct 2615268 CAAGCTGCACGAGGTCACCCAGG-TCCTCGTTCGCAACTTGAACAAGATCATCGATATCA 2615210 Query 364403 ATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTG 364462 | || || || |||| || ||| || || | || || || ||||||| ||||| Sbjct 2615209 ACTACTACCCTGTTCCAGAGGCCAAGAAGAGCAACCTCCGCCACCGTCCGATTGCTCTTG 2615150 Query 364463 GTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACG 364522 |||| | || || || || | || | || || |||| || || ||||| | Sbjct 2615149 GTGTCAATGGTCTTGCCGATGCATTCCTTGCACTGCGCTTGCCATTCGACTCTCCTGAGG 2615090 Query 364523 CTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGT 364582 || | || || | ||||||| || || || || | || | || || ||| Sbjct 2615089 CTAGGCAGCTGAACATTCAGATCTTCGAGACTATCTACCACGGTGCCCTCACCGCGTCGG 2615030 Query 364583 GTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGG 364642 || ||||| || | || | ||| || ||||| || || || | || |||| Sbjct 2615029 TCGAGTTGGCCAAGCAGCATGGCACGTATGAGACATATGAAGGCTCGCCAGTCTCCCAGG 2614970 Query 364643 GAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGC 364702 ||| |||||| ||| | ||| | || || ||| || ||| | ||| ||| Sbjct 2614969 GAATTCTCCAGTATGACATGTGGGACAGGACTCCCACTGACCTCTGGGATTGGAGCTCGC 2614910 Query 364703 TACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC---CTCGTTACAGCGCCCATGC 364759 | | | | ||||| ||| |||||| | ||||| || || |||| Sbjct 2614909 TGAAGGCTGAGATCGCCAAGCACGGTGTCCGCAACAGCTTGCTCGTG---GCTCCTATGC 2614853 Query 364760 CCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCA 364819 |||| || || ||||||||||| || || |||||||| || | || | Sbjct 2614852 CCACTGCGAGCACCAGTCAGATCCTCGGCTTTAATGAATGCTTCGAGCCCTACACCTCGA 2614793 Query 364820 ATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCA 364879 | | ||||| || || |||||| |||| || || | || || || | || ||| Sbjct 2614792 ACATCTATTCCCGTCGTGTTCTTGCCGGCGAGTTCCAAGTTGTCAACCCCTGGCTGCTCA 2614733 Query 364880 AGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTA 364939 |||||||| ||||| || || ||| ||||| |||||||||| |||||| |||| Sbjct 2614732 AGGATCTTGTCGACCTTGGCCTCTGGTCTGACAACATGAAGAACCGTATCATTGCCGAAG 2614673 Query 364940 ATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCG 364999 ||||||| | ||||||||||| | || | ||| | ||| | | ||||| || | Sbjct 2614672 GTGGTTCTATTCAGAACATTCCCAACATCCCTGCAGACATCAAGGCCCTCTACAAGACAG 2614613 Query 365000 TATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCT 365059 | ||||| || || ||| | || || | ||||| || || || ||||| || ||| Sbjct 2614612 TGTGGGAGATCTCGCAGCGCCATATCCTTCAGATGGCTGCTGACCGTGGTGCGTTCATCG 2614553 Query 365060 GTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCA 365119 ||| ||||| | ||| | ||||| |||| || | |||| |||| || Sbjct 2614552 ACCAGTCTCAGTCTCTCAACATTCACATGAAGGAGCCTACTATGGGCAAGATTACCAGCA 2614493 Query 365120 TGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| ||| |||||||| ||||| ||||| || Sbjct 2614492 TGCACTTCGCTGGGTGGAAGATGGGTCTGAAGACTGG 2614456 >seq2 Length=4789688 Score = 87.8 bits (96), Expect = 5e-12 Identities = 151/217 (70%), Gaps = 7/217 (3%) Strand=Plus/Minus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCA--TTCGCGGAAC 22492 || ||||| || ||||| | || ||||| | |||| || || || || || | | Sbjct 2859935 AAGAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGA--GTCCACCTTTGCTCAGC 2859878 Query 22493 GTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCT 22552 |||| |||| || || | || || ||||| ||||| || || | ||| | | |||| Sbjct 2859877 GTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTTGCTTCGATCT 2859818 Query 22553 TTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCC 22612 | ||||| || || |||| | ||||| ||||| || || || || ||| | || | Sbjct 2859817 TCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGAGCTGATCTCTC 2859758 Query 22613 GAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649 | ||||||||||| || ||||| ||||| ||| |||| Sbjct 2859757 GTGATGAGGGTCTGCACACCGACTTTGCTTGTCTGCT 2859721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353048925806