Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 174 1e-38 seq7 131 2e-25 seq1 125 7e-24 seq3 120 3e-22 >seq2 Length=4789688 Score = 174 bits (192), Expect = 1e-38 Identities = 352/512 (69%), Gaps = 9/512 (2%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGAT-CAACAGCAGCACCGCGAC 46145 || ||| | |||||||| | || ||||| || |||||||| || | || | | | Sbjct 2859947 CCTTGCATCCGCAAGAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAGTCCACC 2859888 Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205 ||| || ||||| | || ||||| || |||||||||| |||| || || ||| || Sbjct 2859887 TTT-GCTCAGCGTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTT 2859829 Query 46206 TGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264 ||| | ||||| | | || || | || | | ||||| || || || || ||||| Sbjct 2859828 TGCTTCGATCTTCTGGCTGAAGAAGCGTGGTC-TGATGCCTGGTCTCACCTTCTCCAACG 2859770 Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACACT 46323 ||||||| || || || ||||| ||||| || |||||||| ||||| || | | ||| Sbjct 2859769 AGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTTGCTTGTCTGCTGTTCTCCCAC- 2859711 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383 | | ||| | || || || | || | || ||| ||| || || || || Sbjct 2859710 CTCAACCACCGCC--CTAGCAAG-GAGATTGTCCAGAACATCATCACCGACGCCGTCGCG 2859654 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443 || ||| ||||||| | |||| || ||||||| |||||| ||||||||||| || Sbjct 2859653 ATCGAGCAGGAGTTCCTGACGGATGCTCTGCCCGTCAACCTGCTTGGCATGAACGCCAAG 2859594 Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCG 46503 |||||| | ||||||||||| || || |||||||| |||||| ||| | | | Sbjct 2859593 CTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGACTTCTCGTGGCTCTTGGCAACAAG 2859534 Query 46504 AAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAA 46563 ||| | | |||| |||||| || || || ||| |||||||||| ||| ||||| Sbjct 2859533 AAGTACTACAACGCCACCAATCCCTTCGACTTCATGGACAACATCTCGCTGTCCGGCAAG 2859474 Query 46564 ACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || ||||| ||||| ||||| || || Sbjct 2859473 ACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 2859442 >seq7 Length=1958609 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| ||||| ||||| || || |||||| ||||| |||||||| || Sbjct 430740 GTAGACTCCTTCTGAATATTGTAGTCTGACAAGGTGCGGCCATCCTCCAGCTGCTTACCA 430799 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | ||||||||||||||| || || || || ||||| ||||||| ||| Sbjct 430800 GCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTTC 430859 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | || |||| |||| ||||| ||| || ||||| || || Sbjct 430860 ACGTTATCGATGGTATCTGACGATTCGACTTCGAGGGTAATGGTCTTTCCGGTGAGGGTC 430919 Query 131218 TTTACGAAAATCTGCAT 131234 || |||||||||||||| Sbjct 430920 TTGACGAAAATCTGCAT 430936 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || || ||||| ||| | ||||| |||||| ||||||||||| ||| | Sbjct 430517 CTCCTTCTGGATATTGTAGTCGGAGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAA 430576 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| || ||||||||||| || ||||| || || ||||| ||| || ||| | | Sbjct 430577 GATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTT 430636 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | | ||||| || | |||| ||| || ||||| ||||| || || Sbjct 430637 GTCGATTGTGTCAGAGCTCTCGACCTCCAGCGTAATGGTCTTTCCGGTCAGAGTCTTCAC 430696 Query 131223 GAAAATCTGCAT 131234 ||| |||||||| Sbjct 430697 GAAGATCTGCAT 430708 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | ||| |||||||| || ||||| || ||| Sbjct 431223 CCACCACGGAGACGAAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 431282 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 431283 AGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGG 431342 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 431343 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACC 431402 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | || || ||||| Sbjct 431403 TCAAGGGTGATAGTCTTGCCGGT 431425 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || | || | || |||||| || ||||| || ||| Sbjct 430938 CCACCACGCAGACGCAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAA 430997 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||||||| |||| | ||||||||||| || ||| Sbjct 430998 AGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 431057 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 431058 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACC 431117 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | || || ||||| || || || |||| Sbjct 431118 TCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 431154 >seq1 Length=6618042 Score = 125 bits (138), Expect = 7e-24 Identities = 476/738 (64%), Gaps = 8/738 (1%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| || || ||||||||||| | |||||||| |||| | ||| || ||| |||| Sbjct 2614747 TTGACAACTTGGAACTCGCCGGCAAGAACACGACGGGAATAGATGTTCGAGGTGTAGGGC 2614806 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || | || ||| ||| ||||| ||| ||| | || |||||||| ||||| Sbjct 2614807 TCGAAGCATTCATTAAAGCCGAGGATCTGACTGGTGCTCGCAGTGGGCATAGGAGCCACG 2614866 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| | |||||||| ||| || |||| |||| | ||||||||| Sbjct 2614867 AGCAAGCTGTTGCGGACACCGTGCTTGGCGATCTCAGCCTTCAGCGAGCTCCAATCCCAG 2614926 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || ||| || || |||||||||||| ||||| | ||| |||| | | | || | Sbjct 2614927 AGGTCAGTGGGAGTCCTGTCCCACATGTCATACTGGAGAATTCCCTGGGAGACTGGCGAG 2614986 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | | | || || | ||| | | ||||| | |||| ||| || | Sbjct 2614987 CCTTCATATG-TCTCATAC-GTGCCATGCTGCTTGGCCAACTCGACCGACGCGGTGAGGG 2615044 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | ||| || || |||||| || || |||| ||| || | || ||| ||| Sbjct 2615045 CACCGTGGTAGATAGTCTCGAAGATCTGAATGTTCAGCTGCCTAGCCTCAGGAGAGTCGA 2615104 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | |||| |||||| | || |||||||| || || | | || | | || || | Sbjct 2615105 ATGGCAAGCGCAGTGCAAGGAATGCATCGGCAAGACCATTGACACCAAGAGCAATCGGAC 2615164 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATT 145534 | || | ||||||| || | ||| || | | ||| || || ||||| || Sbjct 2615165 GGTGGCGGAGGTTGCTCTTCTTGGCC-TCTGGAACAGGGTAGTAGTTGATATCGATGATC 2615223 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||||||| || || | |||| || | | ||| ||| |||||||| | | Sbjct 2615224 TTGTTCAAGTTGCGAACGAGGACCTGGGTGACCTCGTGCAGCTTGCCAAAGTCATA-CTC 2615282 Query 145595 GCCTC-GTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653 ||| | | || || | || || || | || | || ||||| || || || || Sbjct 2615283 GCCACGGGCAGCGTCGACGAAGGTAGGCAATGCAAGAGAGGCCAAGTTGCAGACAGCAAC 2615342 Query 145654 CTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCC 145713 ||| || | | |||| || | | ||||| | ||| | ||| | ||| || || Sbjct 2615343 CTCGTCAGGGGCGCTATACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATAGTACC 2615402 Query 145714 CAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCC 145773 ||| || | ||| || || ||||||||||| || |||||||| |||||| | || || Sbjct 2615403 CAGGTTCTTCTGGTTGCTCTTCCTGTTGCAAGCATCCTTGTACAGCATGAATGGGGTTCC 2615462 Query 145774 AGTCTCCACCTGCGTCTC 145791 |||||| ||||| ||| Sbjct 2615463 GGTCTCCGTCTGCGCCTC 2615480 Score = 118 bits (130), Expect = 1e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||||| | || | |||||||||||| || ||||||||||| Sbjct 1741421 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAG 1741362 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| | ||||||||||||||| ||| Sbjct 1741361 AGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1741302 Query 131128 ATTCCTTCTTTGTCGGTG 131145 || || || ||||| ||| Sbjct 1741301 ATACCCTCCTTGTCTGTG 1741284 >seq3 Length=4355815 Score = 120 bits (132), Expect = 3e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| ||||| ||||| |||||||| || ||| ||| Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||||||| ||||| || || ||||| || || ||||| | | Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT 2043610 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||||| ||||| ||||| ||| ||||| || || || || |||| Sbjct 2043611 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2043670 Query 131225 A 131225 | Sbjct 2043671 A 2043671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012605294720