Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq2 174 1e-38
seq7 131 2e-25
seq1 125 7e-24
seq3 120 3e-22
>seq2
Length=4789688
Score = 174 bits (192), Expect = 1e-38
Identities = 352/512 (69%), Gaps = 9/512 (2%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGAT-CAACAGCAGCACCGCGAC 46145
|| ||| | |||||||| | || ||||| || |||||||| || | || | | |
Sbjct 2859947 CCTTGCATCCGCAAGAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAGTCCACC 2859888
Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205
||| || ||||| | || ||||| || |||||||||| |||| || || ||| ||
Sbjct 2859887 TTT-GCTCAGCGTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTT 2859829
Query 46206 TGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264
||| | ||||| | | || || | || | | ||||| || || || || |||||
Sbjct 2859828 TGCTTCGATCTTCTGGCTGAAGAAGCGTGGTC-TGATGCCTGGTCTCACCTTCTCCAACG 2859770
Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACACT 46323
||||||| || || || ||||| ||||| || |||||||| ||||| || | | |||
Sbjct 2859769 AGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTTGCTTGTCTGCTGTTCTCCCAC- 2859711
Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383
| | ||| | || || || | || | || ||| ||| || || || ||
Sbjct 2859710 CTCAACCACCGCC--CTAGCAAG-GAGATTGTCCAGAACATCATCACCGACGCCGTCGCG 2859654
Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443
|| ||| ||||||| | |||| || ||||||| |||||| ||||||||||| ||
Sbjct 2859653 ATCGAGCAGGAGTTCCTGACGGATGCTCTGCCCGTCAACCTGCTTGGCATGAACGCCAAG 2859594
Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCG 46503
|||||| | ||||||||||| || || |||||||| |||||| ||| | | |
Sbjct 2859593 CTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGACTTCTCGTGGCTCTTGGCAACAAG 2859534
Query 46504 AAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAA 46563
||| | | |||| |||||| || || || ||| |||||||||| ||| |||||
Sbjct 2859533 AAGTACTACAACGCCACCAATCCCTTCGACTTCATGGACAACATCTCGCTGTCCGGCAAG 2859474
Query 46564 ACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| || || ||||| ||||| ||||| || ||
Sbjct 2859473 ACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 2859442
>seq7
Length=1958609
Score = 131 bits (144), Expect = 2e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| ||||| ||||| || || |||||| ||||| |||||||| ||
Sbjct 430740 GTAGACTCCTTCTGAATATTGTAGTCTGACAAGGTGCGGCCATCCTCCAGCTGCTTACCA 430799
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| |||| | ||||||||||||||| || || || || ||||| ||||||| |||
Sbjct 430800 GCGAAGATAAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTTC 430859
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | ||||| | || |||| |||| ||||| ||| || ||||| || ||
Sbjct 430860 ACGTTATCGATGGTATCTGACGATTCGACTTCGAGGGTAATGGTCTTTCCGGTGAGGGTC 430919
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||||||||||||
Sbjct 430920 TTGACGAAAATCTGCAT 430936
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| || || ||||| ||| | ||||| |||||| ||||||||||| ||| |
Sbjct 430517 CTCCTTCTGGATATTGTAGTCGGAGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAA 430576
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
||| || ||||||||||| || ||||| || || ||||| ||| || ||| | |
Sbjct 430577 GATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTCACGTT 430636
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | || || | | ||||| || | |||| ||| || ||||| ||||| || ||
Sbjct 430637 GTCGATTGTGTCAGAGCTCTCGACCTCCAGCGTAATGGTCTTTCCGGTCAGAGTCTTCAC 430696
Query 131223 GAAAATCTGCAT 131234
||| ||||||||
Sbjct 430697 GAAGATCTGCAT 430708
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| | || | ||| |||||||| || ||||| || |||
Sbjct 431223 CCACCACGGAGACGAAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 431282
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| || ||||||||||| || |||
Sbjct 431283 AGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGG 431342
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || ||| | ||||| |
Sbjct 431343 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACC 431402
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | ||| | || || |||||
Sbjct 431403 TCAAGGGTGATAGTCTTGCCGGT 431425
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||| || | || | || |||||| || ||||| || |||
Sbjct 430938 CCACCACGCAGACGCAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGGAA 430997
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||||||| |||| | ||||||||||| || |||
Sbjct 430998 AGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 431057
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || ||| | ||||| |
Sbjct 431058 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACC 431117
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|| | ||| | || || ||||| || || || ||||
Sbjct 431118 TCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 431154
>seq1
Length=6618042
Score = 125 bits (138), Expect = 7e-24
Identities = 476/738 (64%), Gaps = 8/738 (1%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| || || ||||||||||| | |||||||| |||| | ||| || ||| ||||
Sbjct 2614747 TTGACAACTTGGAACTCGCCGGCAAGAACACGACGGGAATAGATGTTCGAGGTGTAGGGC 2614806
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || | || ||| ||| ||||| ||| ||| | || |||||||| |||||
Sbjct 2614807 TCGAAGCATTCATTAAAGCCGAGGATCTGACTGGTGCTCGCAGTGGGCATAGGAGCCACG 2614866
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || ||||| | |||||||| ||| || |||| |||| | |||||||||
Sbjct 2614867 AGCAAGCTGTTGCGGACACCGTGCTTGGCGATCTCAGCCTTCAGCGAGCTCCAATCCCAG 2614926
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| ||| || || |||||||||||| ||||| | ||| |||| | | | || |
Sbjct 2614927 AGGTCAGTGGGAGTCCTGTCCCACATGTCATACTGGAGAATTCCCTGGGAGACTGGCGAG 2614986
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355
|||| | | | || || | ||| | | ||||| | |||| ||| || |
Sbjct 2614987 CCTTCATATG-TCTCATAC-GTGCCATGCTGCTTGGCCAACTCGACCGACGCGGTGAGGG 2615044
Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415
| ||| || || |||||| || || |||| ||| || | || ||| |||
Sbjct 2615045 CACCGTGGTAGATAGTCTCGAAGATCTGAATGTTCAGCTGCCTAGCCTCAGGAGAGTCGA 2615104
Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475
| |||| |||||| | || |||||||| || || | | || | | || || |
Sbjct 2615105 ATGGCAAGCGCAGTGCAAGGAATGCATCGGCAAGACCATTGACACCAAGAGCAATCGGAC 2615164
Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATT 145534
| || | ||||||| || | ||| || | | ||| || || ||||| ||
Sbjct 2615165 GGTGGCGGAGGTTGCTCTTCTTGGCC-TCTGGAACAGGGTAGTAGTTGATATCGATGATC 2615223
Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594
|| |||||||| || || | |||| || | | ||| ||| |||||||| | |
Sbjct 2615224 TTGTTCAAGTTGCGAACGAGGACCTGGGTGACCTCGTGCAGCTTGCCAAAGTCATA-CTC 2615282
Query 145595 GCCTC-GTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGT 145653
||| | | || || | || || || | || | || ||||| || || || ||
Sbjct 2615283 GCCACGGGCAGCGTCGACGAAGGTAGGCAATGCAAGAGAGGCCAAGTTGCAGACAGCAAC 2615342
Query 145654 CTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCC 145713
||| || | | |||| || | | ||||| | ||| | ||| | ||| || ||
Sbjct 2615343 CTCGTCAGGGGCGCTATACTCGATAATCTCAGTGCAGAGGTTGGAGCTGCGGATAGTACC 2615402
Query 145714 CAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCC 145773
||| || | ||| || || ||||||||||| || |||||||| |||||| | || ||
Sbjct 2615403 CAGGTTCTTCTGGTTGCTCTTCCTGTTGCAAGCATCCTTGTACAGCATGAATGGGGTTCC 2615462
Query 145774 AGTCTCCACCTGCGTCTC 145791
|||||| ||||| |||
Sbjct 2615463 GGTCTCCGTCTGCGCCTC 2615480
Score = 118 bits (130), Expect = 1e-21
Identities = 109/138 (79%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||||| | || | |||||||||||| || |||||||||||
Sbjct 1741421 CCACCACGCAGGCGCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAG 1741362
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| |||||||| || ||| |||| | ||||||||||||||| |||
Sbjct 1741361 AGGGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1741302
Query 131128 ATTCCTTCTTTGTCGGTG 131145
|| || || ||||| |||
Sbjct 1741301 ATACCCTCCTTGTCTGTG 1741284
>seq3
Length=4355815
Score = 120 bits (132), Expect = 3e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||||||| ||||| ||||| |||||||| || ||| |||
Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||||||||| ||||| || || ||||| || || ||||| | |
Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT 2043610
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || ||| | ||||||| ||||| ||||| ||| ||||| || || || || ||||
Sbjct 2043611 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2043670
Query 131225 A 131225
|
Sbjct 2043671 A 2043671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012605294720
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