Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1 179 5e-40
>seq1
Length=6618042
Score = 179 bits (198), Expect = 5e-40
Identities = 581/896 (65%), Gaps = 6/896 (1%)
Strand=Plus/Plus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|||||||| || || | |||| | || |||||| || | || || | || | |
Sbjct 2615611 TCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTGGGGCAGAACAGTGTC 2615670
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
|| || |||| ||| || || ||||| ||||| || ||| |||| ||||| ||
Sbjct 2615671 CAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTCCAGAGAGCGTAGAAG 2615730
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172
||||| | | |||| ||| || || || ||||| |||||| | ||| | |
Sbjct 2615731 AGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGATCCAAGAAGTCGAAG 2615790
Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232
|||||||| ||||| || |||| ||| || || | | | ||||| || ||||||||||||
Sbjct 2615791 ATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGGCGCTTGTTTCCTCCC 2615850
Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292
|| || | |||||| || ||||| || | || | | ||| || | ||| || |||||
Sbjct 2615851 TGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGGACAATTCCGTTGGAA 2615910
Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352
| |||||||| || ||||| ||| || |||| || ||| || |||||
Sbjct 2615911 GATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGGTGGATGTTGAGACCA 2615970
Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 63412
|| || || || | || ||||| | || || || | || || || || |||||
Sbjct 2615971 ATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTGTCGTAAATACCCTCA 2616030
Query 63413 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 63472
|| || || ||| |||||| | || || ||| | | || | || ||| ||
Sbjct 2616031 ATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCTGCGGCTGAGGAGTACCG 2616090
Query 63473 GCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63532
|| || || | ||| |||||||| ||||| || | || | || | || |||||||||
Sbjct 2616091 GCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGGACATCAGGTTGTACGTC 2616150
Query 63533 TCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 63591
||||| | || || || || | || ||||| || || |||||||| | ||||||
Sbjct 2616151 TCAATGACCTTCTCAATGTCATCACCG-TGGATTCCAACAGCAACACGCATAATCATGTG 2616209
Query 63592 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 63651
||| || | ||| | | |||| || || | |||||| || |||| || ||
Sbjct 2616210 CTGGGGACGTTCCGCAACCTTGCCATTGATCCGAAGCAAGTATGAGCGCTCCAGGGTCTT 2616269
Query 63652 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 63711
|| || ||||| | || ||||| || || || | || | ||||| | || ||
Sbjct 2616270 GAATCCGAAATATTGATAGTTGAAGTCACGGTCATACACGATGGCGGAGTTCAATTCGTC 2616329
Query 63712 CTTATATTTGTTAACTACATC-CATGGTAATACTT-GAAATAATAGGAAAATGTTTCCCA 63769
| || ||| |||| || || ||| | | ||| || || || ||| | | ||
Sbjct 2616330 CGCATGTTTCATAACGACCTCATATGTT--TCCTTCGATATCATCGGAGCGGGCTGGCCG 2616387
Query 63770 TTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTT 63829
|| || || |||||||||| | | | || || || ||| | || || ||
Sbjct 2616388 TTCTTCGGGTTGACATAGTGGTACAGGTCTGAGATAACCAGGGAAAACTGCTTCTTCGTC 2616447
Query 63830 TCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885
| ||||| || || || |||||||| | || || || || ||||| || || ||
Sbjct 2616448 TGCTTGTGCAGGTTCGACACGGCTATACGCGCAGCGAGGATTGCATAGTCTGGGTG 2616503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631738626800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |