Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7 104 2e-17 >seq7 Length=1958609 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| | ||||| || |||| || ||||||| || ||||| Sbjct 430937 AATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATTACCCTCGAAGTCGAATCGTC 430878 Query 25058 TGACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| | || ||||| |||||| ||||| || || ||||| || |||| Sbjct 430877 AGATACCATCGA-TAACGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCGGACC 430819 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| |||| || || || || || | || |||| ||||| || || |||| Sbjct 430818 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCAGACTACA 430759 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||| || || || || || || | || || | || | ||||||| Sbjct 430758 ATATTCAGAAGGAGTCTACACTGCACCTTGTCCTCCGCCTGCGTGGAGGAA 430708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327825720895