Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq7 107 2e-18 seq1 87.8 2e-12 >seq7 Length=1958609 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || || | || || ||||| ||| | | Sbjct 430936 ATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATTACCCTCGAAGTCGAATCGTCA 430877 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || ||||| || ||||||||||||||||| || || || Sbjct 430876 GATACCATCGATAACGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 430817 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | |||||| ||||||| | || || ||||| Sbjct 430816 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCAGACTACAAT 430757 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 430756 ATTCAGAAGGAGTCTAC 430740 Score = 89.7 bits (98), Expect = 4e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || ||||| | | ||| ||| | ||| | |||| Sbjct 431140 ACCGGCAAGACTATCACCCTGGAGGTGGAGTCGAGCGACACCATCGACAACGTCAAGTCC 431081 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || || || || || || || || ||||| Sbjct 431080 AAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCCTGATCTTCGCAGGCAAG 431021 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409 ||| | |||||| ||||||| | ||||| || ||||| || || || Sbjct 431020 CAGCTCGAGGATGGCCGCACCCTTTCCGACTATAACATCCAGAAGGA 430974 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| ||||| | | ||| ||| | ||| | |||| Sbjct 431425 ACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAGCGACACCATCGACAACGTCAAGTCC 431366 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || || || || | || || || ||||| Sbjct 431365 AAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCTTGATCTTCGCGGGCAAG 431306 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||| ||||||| || ||||| || || || |||||| Sbjct 431305 CAGCTTGAGGACGGTCGCACGCTCTCCGACTATAACATCCAGAAGGAGTCCACC 431252 >seq1 Length=6618042 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 ||||||||||||||| || || || || || ||||| || || || || || ||| | || Sbjct 1741287 AGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGA 1741346 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 ||| ||||||| |||| ||||||||||| || || || || ||| | || | || | Sbjct 1741347 GGACGGCCGCACCCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTCCACCTGGTGCT 1741406 Query 22431 GCGATTGCGCGGAGGT 22446 ||| |||| || ||| Sbjct 1741407 GCGCCTGCGTGGTGGT 1741422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727831190645