Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq7 107 2e-18
seq1 87.8 2e-12
>seq7
Length=1958609
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | ||||| || || | || || ||||| ||| | |
Sbjct 430936 ATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATTACCCTCGAAGTCGAATCGTCA 430877
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | | || ||||| || ||||||||||||||||| || || ||
Sbjct 430876 GATACCATCGATAACGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 430817
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| || || || || ||| | |||||| ||||||| | || || |||||
Sbjct 430816 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCAGACTACAAT 430757
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || || || ||
Sbjct 430756 ATTCAGAAGGAGTCTAC 430740
Score = 89.7 bits (98), Expect = 4e-13
Identities = 120/167 (72%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| || || ||||| | | ||| ||| | ||| | ||||
Sbjct 431140 ACCGGCAAGACTATCACCCTGGAGGTGGAGTCGAGCGACACCATCGACAACGTCAAGTCC 431081
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || |||||||||||||| || || || || || || || || || || |||||
Sbjct 431080 AAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCCTGATCTTCGCAGGCAAG 431021
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409
||| | |||||| ||||||| | ||||| || ||||| || || ||
Sbjct 431020 CAGCTCGAGGATGGCCGCACCCTTTCCGACTATAACATCCAGAAGGA 430974
Score = 89.7 bits (98), Expect = 4e-13
Identities = 124/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| ||||| | | ||| ||| | ||| | ||||
Sbjct 431425 ACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAGCGACACCATCGACAACGTCAAGTCC 431366
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || |||||||||||||| || || || || || || | || || || |||||
Sbjct 431365 AAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAGCAGCGCTTGATCTTCGCGGGCAAG 431306
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | ||||| ||||| ||||||| || ||||| || || || ||||||
Sbjct 431305 CAGCTTGAGGACGGTCGCACGCTCTCCGACTATAACATCCAGAAGGAGTCCACC 431252
>seq1
Length=6618042
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
||||||||||||||| || || || || || ||||| || || || || || ||| | ||
Sbjct 1741287 AGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGA 1741346
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430
||| ||||||| |||| ||||||||||| || || || || ||| | || | || |
Sbjct 1741347 GGACGGCCGCACCCTCTCGGATTACAACATCCAGAAGGAGTCGACCCTCCACCTGGTGCT 1741406
Query 22431 GCGATTGCGCGGAGGT 22446
||| |||| || |||
Sbjct 1741407 GCGCCTGCGTGGTGGT 1741422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727831190645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |