Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq7 158 2e-33
seq3 129 1e-24
seq2 123 5e-23
>seq7
Length=1958609
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
||||||| || ||||| | || | ||| || || ||||| || || || || || || |
Sbjct 430708 TTCCTCCACGCAGGCGGAGGACAAGGTGCAGTGTAGACTCCTTCTGAATATTGTAGTCTG 430767
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| | || | ||||| || | |||||| || ||||| || || | || ||||| || |
Sbjct 430768 ACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCCGGGG 430827
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
|||| || |||||||| || || || | ||| ||| |||||||| |||| ||||| |
Sbjct 430828 GAATACCCTCCTTGTCCTGGATTTTCGACTTCACGTTATCGATGGTATCTGACGATTCGA 430887
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||| | ||| ||||| ||||| ||||||||||||||||| |||||||||
Sbjct 430888 CTTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCATT 430937
Score = 150 bits (166), Expect = 3e-31
Identities = 167/220 (76%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || || || |||| || | ||| || ||| ||| || ||||||||||| ||||
Sbjct 430936 TTCCACCACGCAGACGCAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGG 430995
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | ||||| || | |||||| || ||||| || || | || ||||| || |
Sbjct 430996 AAAGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGG 431055
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411
| || || |||||||| || ||||| | ||||||| ||||||||||| ||| || ||
Sbjct 431056 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTC-GCTCGACTCC 431114
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| |||| |||||| || || || ||||||||||||||||
Sbjct 431115 ACCTCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 431154
Score = 125 bits (138), Expect = 1e-23
Identities = 153/206 (74%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || || || || | |||| ||| || |||||||| || ||||||||||| ||||
Sbjct 431221 TTCCACCACGGAGACGAAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGG 431280
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
|||| || | || || || | |||||| || ||||| || | | || ||||| || |
Sbjct 431281 AGAGCGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGG 431340
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411
| || || |||||||| || ||||| | ||||||| ||||||||||| ||| || ||
Sbjct 431341 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTC-GCTCGACTCC 431399
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGT 68437
|| || | |||||| || || || ||
Sbjct 431400 ACCTCAAGGGTGATAGTCTTGCCGGT 431425
>seq3
Length=4355815
Score = 129 bits (142), Expect = 1e-24
Identities = 138/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| || ||||| ||
Sbjct 2043493 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATA 2043552
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || || || || |||||||| |||||||| ||||||||| |||
Sbjct 2043553 AGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCG 2043612
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 2043613 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2043671
Score = 91.5 bits (100), Expect = 3e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 225514 GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTC 225573
|||||| |||||| |||||||| |||||| ||||||||||| |||||||| | ||
Sbjct 661184 GAGCCACTTCACGTTTGCGACGTCCAAGTGGTTGGTAGGTTCGTCAAGAAGCAGAACATC 661243
Query 225574 AGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGA 225633
||| | |||| || ||||| | || | ||||||||| ||||| || || || || ||
Sbjct 661244 AGCCTTCTTGAGCATTGCGCGGGCCAGCGCCAGCTTCATCTTCCAACCACCAGAGAGAGA 661303
Query 225634 GCCGA 225638
||||
Sbjct 661304 ACCGA 661308
>seq2
Length=4789688
Score = 123 bits (136), Expect = 5e-23
Identities = 312/470 (66%), Gaps = 6/470 (1%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| ||||||
Sbjct 2859423 CATGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGA 2859482
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || ||| ||||||||||| ||||| || |||| | | ||| || ||
Sbjct 2859483 CAGCGAGATGTTGTCCATGAAGTCGAAGGGATTGGTGGCGTTGTAGTACTTCTTGTTGCC 2859542
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
|| || || || |||||||| ||||||||||||||||||| ||| || | | |||
Sbjct 2859543 AAGAGCCACGAGAAGTCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTT 2859602
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||||| || | | ||| | || || | ||| |||| ||| | ||||| ||
Sbjct 2859603 CATGCCAAGCAGGTTGACGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGC 2859662
Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAG 10234
|| || |||| ||| || | || | | || | ||| | || ||||
Sbjct 2859663 GTCGGTGATGATGTTCTGGACAATCTCCTTGCTAGGGCGGTGGTTGAGGTGGGAGAACAG 2859722
Query 10235 GAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACC 10294
|| |||| | ||| || ||||| || || ||| | ||||||||| ||
Sbjct 2859723 CAGACAAGCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGT 2859782
Query 10295 CAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAAT-GGCGCAGAACGACCCGGAGA 10353
||||| ||||| || || || || ||||||||| || | ||| || || |||||||
Sbjct 2859783 GAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCA-AAGGAGCCGGAGA 2859841
Query 10354 ACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401
|||||| |||||||| | |||| ||||| |||| || ||||
Sbjct 2859842 --AGAAGATGCCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGG 2859889
Score = 95.1 bits (104), Expect = 2e-14
Identities = 187/276 (68%), Gaps = 8/276 (3%)
Strand=Plus/Plus
Query 10515 TCAAGGAGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAG 10574
|||| |||||||||||| |||| ||||| | |||| | |||| || | |||
Sbjct 2860058 TCAATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAG 2860117
Query 10575 AACATACGTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATC 10634
|| ||| ||| |||| || ||| ||| || ||| | |||||| || |
Sbjct 2860118 AAGCAACGAGCCTCGGGGACCTGGACCTCCCCGCTGAAGCGCTCCACCAGGTTTTCGTTG 2860177
Query 10635 ACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCA 10694
|| || || ||| | || |||||| |||||| ||| |||||||| ||||||||||
Sbjct 2860178 ACGATTCCGTCGGACGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGTAGCGCTCATCA 2860237
Query 10695 TCGTTCA----GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCAC 10750
||||||| ||| || |||||| | |||| | || | | |||||| |
Sbjct 2860238 TCGTTCAGGCGGTTGTT----CCAGTCGTGAAGGTCCTTGGACAGGTCAATCTCCTCTGC 2860293
Query 10751 GGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
|||||||| | ||| |||||||||||||||||||
Sbjct 2860294 AGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTG 2860329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622019830760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |