Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 3e-19
>seq2
Length=4789688
Score = 111 bits (122), Expect = 3e-19
Identities = 310/468 (66%), Gaps = 6/468 (1%)
Strand=Plus/Minus
Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348
|||||| |||||||||| |||| | || || || || | || ||||| ||
Sbjct 2859887 TTTGCTCAGCGTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTT- 2859829
Query 243349 TGCGCC-ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGA 243407
||| | ||||| |||||| ||| ||| |||||||||| ||| | || |||||
Sbjct 2859828 TGCTTCGATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGA 2859769
Query 243408 GTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCT 243467
| | ||| ||| || ||||| || ||| | || | | || ||| || | ||
Sbjct 2859768 GCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTTGCTTGTCTGCTGTTCTCCCACCT 2859709
Query 243468 CCAGAACAAGC-TACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACG 243526
| | || | || || || | ||| | | |||||||| || || || | | ||
Sbjct 2859708 CAACCACCGCCCTAGCAAG-GAGATTGTCCAGAACATCATCACCGACGCCGTCGCGATCG 2859650
Query 243527 AAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCA 243586
| |||| ||| | || ||| | || | || ||||||||||| | | ||||
Sbjct 2859649 AGCAGGAGTTCCTGACGGATGCTCTGCCCGTCAACCTGCTTGGCATGAACGCCAAGCTCA 2859590
Query 243587 TGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAG 243646
|| | ||||||||||| ||||| || ||||| || || | || ||||| | ||||
Sbjct 2859589 TGTGCCAGTACATCGAGTTCGTCGCTGACCGACTTCTCGTGGCTCTTGGCAACAAGAAGT 2859530
Query 243647 TGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTA 243706
|||||| ||| || ||||| | ||| ||||| ||| ||||| || || || |
Sbjct 2859529 ACTACAACGCCACCAATCCCTTCGACTTCATGGACAACATCTCGCTGTCCGGCAAGACCA 2859470
Query 243707 ACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753
|||||||||| ||||||||| |||| || || | | || ||||| |||
Sbjct 2859469 ACTTCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTCATG 2859423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879533688550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |