Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 165 1e-35 seq2 152 6e-32 >seq1 Length=6618042 Score = 165 bits (182), Expect = 1e-35 Identities = 417/626 (67%), Gaps = 16/626 (3%) Strand=Plus/Plus Query 114702 TTGTG-TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT 114760 ||||| || || || || ||||| || || | || | ||| || || |||| | Sbjct 2615596 TTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTG 2615655 Query 114761 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATC 114820 |||||||| || | ||| | ||| | |||| |||||||||||||||||||| || || Sbjct 2615656 GGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTC 2615715 Query 114821 CAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 114880 |||||||| |||||||||| ||| | | ||||||| | || || || || | Sbjct 2615716 CAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGA 2615775 Query 114881 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 114940 ||||| ||||| | |||||| | |||||| || |||||||| | |||| | || | Sbjct 2615776 TCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACC---A 2615832 Query 114941 CGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATT 114994 | || || |||||| || || || || ||| || || || || ||||| Sbjct 2615833 GGGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATG 2615892 Query 114995 GGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGA 115052 || | || || | || ||||| || || || || ||| | |||| | || Sbjct 2615893 GGGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCC--GGTGGCGCGGA 2615950 Query 115053 CATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 115112 | ||||||| | ||||||||| || || ||||||||| |||| || | ||| Sbjct 2615951 TACGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGA 2616010 Query 115113 GACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACA 115172 || || |||| || || || || ||| |||| | ||| ||||||||| | | Sbjct 2616011 GAGTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGA 2616070 Query 115173 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT- 115231 || ||| || ||||| |||||||| |||||||| | || || |||| ||| | Sbjct 2616071 GCTGCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAA-GTACTTC 2616129 Query 115232 TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 115291 ||||||||| | ||| ||||| | ||| |||||| || ||||| || || | Sbjct 2616130 TGGGACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAACA 2616189 Query 115292 GAGACCCGCATAAACATGTATTGGGG 115317 | || ||||||| ||||| ||||| Sbjct 2616190 GCAACACGCATAATCATGTGCTGGGG 2616215 Score = 105 bits (116), Expect = 8e-18 Identities = 348/527 (66%), Gaps = 23/527 (4%) Strand=Plus/Minus Query 10789 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 10848 |||||| ||||| || || | || || | |||||| | ||| | |||||| | || Sbjct 699631 ATCAAACCGACCGGGTCGCATCAGAGCCTTGTCAAGAACATCTGGTCTGTTCGTTCCAGC 699572 Query 10849 GATGACAACGA--TGCCC-GTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATT 10905 || ||| |||| ||| | | | ||| ||||| ||||||||||| | || || || Sbjct 699571 GAGGACCACGACTTGCTCAGACGTGTTG---AAGCCGTCCATCTCAGTGAGGATCTGGTT 699515 Query 10906 GATGGTTTGTTCGCGTTCATCATT--CGCGGGCATACCACCC----GCACTGCGTTGCTT 10959 | || || || || || || ||| | || | | | || || || | || Sbjct 699514 CAGTGTACTCTCCCGCTCGTCGTTACCGCCGCCAAAACTCTGTTTAGCTCT-CGAT--TT 699458 Query 10960 ACCGACGGCGTCAATTTCATCGATGAAAACGATACACGG-TTGATTTTCACGGGCAACTT 11018 ||||| |||||| |||||||||||||| | ||||| || || | ||| ||||| Sbjct 699457 ACCGATGGCGTCGATTTCATCGATGAATATAATACAGGGAGTGTTCTTC-CGGGCGTTGG 699399 Query 11019 CAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGG 11078 | || | ||| ||||| | | | ||||||||| || ||||| || || || | || | Sbjct 699398 CGAACAGATCACGGACACGCGATGGACCGACACCGACGAACATCTCAACGAATTCGGAGC 699339 Query 11079 CG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11137 || ||| | || |||||| || ||||||||| || | || ||||| || ||| Sbjct 699338 CGCTGACACT-GAAGAAGGGAACTCCGGATTCACCAGCCGTTGCCTTTGCGAGCAGAGTC 699280 Query 11138 TTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC--ACTTC 11195 || || || || || ||||| ||||| ||||| || || ||| ||||||| |||| Sbjct 699279 TTACCGGTACCCGGAGGCCCTGAGAGAATAGCACCGCGGGGAATCTTGGCACCGAGCTTC 699220 Query 11196 CAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTCGCAG 11255 | | |||| || || || |||||| || | || | ||| |||| || Sbjct 699219 --TGGAACTGCTCCGGCTGCTTCAGGAAGCTGACAAACTCCATGATTTCCACCTTGGCCT 699162 Query 11256 CGTCGATGCCTTCAACGTCACTGAAGCGTGTTTTGATTTCCTGCTCG 11302 |||| |||||| | ||||| ||| | ||||||| ||| |||| Sbjct 699161 CGTCCATGCCTGCGACGTCGGAGAATCTGATTTTGATATCCGTCTCG 699115 >seq2 Length=4789688 Score = 152 bits (168), Expect = 6e-32 Identities = 161/209 (77%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| |||||||| ||||| ||||| || || || |||||| || || Sbjct 2859730 GCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCA 2859789 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| ||||| |||||||||| |||||| |||| | ||| || || ||||||||||| Sbjct 2859790 GGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGATG 2859849 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCA 126223 ||||||||| ||||| |||| |||||||| |||||||| | |||| |||| | | Sbjct 2859850 CCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGGTG---GACTCCTTGTCCTGA 2859906 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTT 126252 | |||||| || ||||||| ||||| || Sbjct 2859907 ATCCACTTGATGGCCCACTCAGCCTTCTT 2859935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353353591640