Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1 165 1e-35
seq2 152 6e-32
>seq1
Length=6618042
Score = 165 bits (182), Expect = 1e-35
Identities = 417/626 (67%), Gaps = 16/626 (3%)
Strand=Plus/Plus
Query 114702 TTGTG-TAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT 114760
||||| || || || || ||||| || || | || | ||| || || |||| |
Sbjct 2615596 TTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTG 2615655
Query 114761 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATC 114820
|||||||| || | ||| | ||| | |||| |||||||||||||||||||| || ||
Sbjct 2615656 GGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTC 2615715
Query 114821 CAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 114880
|||||||| |||||||||| ||| | | ||||||| | || || || || |
Sbjct 2615716 CAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGA 2615775
Query 114881 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTA 114940
||||| ||||| | |||||| | |||||| || |||||||| | |||| | || |
Sbjct 2615776 TCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACC---A 2615832
Query 114941 CGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATT 114994
| || || |||||| || || || || ||| || || || || |||||
Sbjct 2615833 GGGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATG 2615892
Query 114995 GGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGA 115052
|| | || || | || ||||| || || || || ||| | |||| | ||
Sbjct 2615893 GGGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCC--GGTGGCGCGGA 2615950
Query 115053 CATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 115112
| ||||||| | ||||||||| || || ||||||||| |||| || | |||
Sbjct 2615951 TACGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGA 2616010
Query 115113 GACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACA 115172
|| || |||| || || || || ||| |||| | ||| ||||||||| | |
Sbjct 2616011 GAGTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGA 2616070
Query 115173 TTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT- 115231
|| ||| || ||||| |||||||| |||||||| | || || |||| ||| |
Sbjct 2616071 GCTGCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAA-GTACTTC 2616129
Query 115232 TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 115291
||||||||| | ||| ||||| | ||| |||||| || ||||| || || |
Sbjct 2616130 TGGGACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAACA 2616189
Query 115292 GAGACCCGCATAAACATGTATTGGGG 115317
| || ||||||| ||||| |||||
Sbjct 2616190 GCAACACGCATAATCATGTGCTGGGG 2616215
Score = 105 bits (116), Expect = 8e-18
Identities = 348/527 (66%), Gaps = 23/527 (4%)
Strand=Plus/Minus
Query 10789 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 10848
|||||| ||||| || || | || || | |||||| | ||| | |||||| | ||
Sbjct 699631 ATCAAACCGACCGGGTCGCATCAGAGCCTTGTCAAGAACATCTGGTCTGTTCGTTCCAGC 699572
Query 10849 GATGACAACGA--TGCCC-GTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATT 10905
|| ||| |||| ||| | | | ||| ||||| ||||||||||| | || || ||
Sbjct 699571 GAGGACCACGACTTGCTCAGACGTGTTG---AAGCCGTCCATCTCAGTGAGGATCTGGTT 699515
Query 10906 GATGGTTTGTTCGCGTTCATCATT--CGCGGGCATACCACCC----GCACTGCGTTGCTT 10959
| || || || || || || ||| | || | | | || || || | ||
Sbjct 699514 CAGTGTACTCTCCCGCTCGTCGTTACCGCCGCCAAAACTCTGTTTAGCTCT-CGAT--TT 699458
Query 10960 ACCGACGGCGTCAATTTCATCGATGAAAACGATACACGG-TTGATTTTCACGGGCAACTT 11018
||||| |||||| |||||||||||||| | ||||| || || | ||| |||||
Sbjct 699457 ACCGATGGCGTCGATTTCATCGATGAATATAATACAGGGAGTGTTCTTC-CGGGCGTTGG 699399
Query 11019 CAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGG 11078
| || | ||| ||||| | | | ||||||||| || ||||| || || || | || |
Sbjct 699398 CGAACAGATCACGGACACGCGATGGACCGACACCGACGAACATCTCAACGAATTCGGAGC 699339
Query 11079 CG-GAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11137
|| ||| | || |||||| || ||||||||| || | || ||||| || |||
Sbjct 699338 CGCTGACACT-GAAGAAGGGAACTCCGGATTCACCAGCCGTTGCCTTTGCGAGCAGAGTC 699280
Query 11138 TTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC--ACTTC 11195
|| || || || || ||||| ||||| ||||| || || ||| ||||||| ||||
Sbjct 699279 TTACCGGTACCCGGAGGCCCTGAGAGAATAGCACCGCGGGGAATCTTGGCACCGAGCTTC 699220
Query 11196 CAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTCGCAG 11255
| | |||| || || || |||||| || | || | ||| |||| ||
Sbjct 699219 --TGGAACTGCTCCGGCTGCTTCAGGAAGCTGACAAACTCCATGATTTCCACCTTGGCCT 699162
Query 11256 CGTCGATGCCTTCAACGTCACTGAAGCGTGTTTTGATTTCCTGCTCG 11302
|||| |||||| | ||||| ||| | ||||||| ||| ||||
Sbjct 699161 CGTCCATGCCTGCGACGTCGGAGAATCTGATTTTGATATCCGTCTCG 699115
>seq2
Length=4789688
Score = 152 bits (168), Expect = 6e-32
Identities = 161/209 (77%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| |||||||| ||||| ||||| || || || |||||| || ||
Sbjct 2859730 GCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCA 2859789
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||| ||||| |||||||||| |||||| |||| | ||| || || |||||||||||
Sbjct 2859790 GGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGATG 2859849
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCA 126223
||||||||| ||||| |||| |||||||| |||||||| | |||| |||| | |
Sbjct 2859850 CCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGGTG---GACTCCTTGTCCTGA 2859906
Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTT 126252
| |||||| || ||||||| ||||| ||
Sbjct 2859907 ATCCACTTGATGGCCCACTCAGCCTTCTT 2859935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353353591640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |