Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 194 2e-44 >seq1 Length=6618042 Score = 194 bits (214), Expect = 2e-44 Identities = 426/630 (68%), Gaps = 14/630 (2%) Strand=Plus/Minus Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792 ||||| || |||||| || ||| | || ||| |||||| |||| | || || || Sbjct 2616272 TTCAAGACCCTGGAGCGCTCATACTTGCTTCGGATCAATGGCAAGGTTGCGGAACGTCCC 2616213 Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAATGTTTTG 93852 || || || | ||||| || || | || || ||||| | ||||| ||| || | Sbjct 2616212 CAGCACATGATTATGCGTGTTGCTGTTGGAATCCACGGTGATGACATTGAGAAGGTCATT 2616153 Query 93853 CGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---AC-CATGGCCACCCCGACCCTGTT 93908 | | | || || || | | ||| ||| || |||| | | || |||||||| Sbjct 2616152 GAGACGTACA---ACCTGATGTCCCAGAAGTACTTCACTCATG-CTTCTCCAACCCTGTT 2616097 Query 93909 CAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAAGGCCG 93967 |||||| || || || ||| ||| | | || || ||||| | ||| | |||| | Sbjct 2616096 CAACGCCGGTACTCCTCAGCCGCAGCTCGCCTCCTGCTTCCTCGTCGAC-ATGAAGGAAG 2616038 Query 93968 ACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGG 94027 || ||| || |||| ||||| |||||| |||||| |||||||| ||| | Sbjct 2616037 ACAGCATTGAGGGTATTTACGACACTCTCAAGACTTGTGCGCTGATCTCAAAGACCGCTG 2615978 Query 94028 GGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTACATCCGCGGTAC 94085 | || || || ||| ||||| |||| || |||| || ||||||||| ||||| Sbjct 2615977 GTGGTATTGGTCTCAACATCCAC--CGTATCCGCGCCACCGGCTCCTACATCTCTGGTAC 2615920 Query 94086 CAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTA 94145 |||||| | |||||||| | ||||| ||||||||||||||||||||| | || | || Sbjct 2615919 CAATGGATCTTCCAACGGAATTGTCCCCATGCTCCGGGTCTTCAACAACACTGCCAGATA 2615860 Query 94146 CGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205 ||| |||||||| || | | | ||| ||||||| |||| || ||||| ||||| Sbjct 2615859 CGTCGACCAGGGAGGAAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCTTGGCA 2615800 Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265 | | || | | ||| | || || || |||||||||||||| || | || || Sbjct 2615799 CTCTGATATCTTCGACTTCTTGGATCTTCGCAAGAACCACGGCAAGGAAGAAGTTAGAGC 2615740 Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325 | || |||||||||||||||||| || ||||| || ||||| || |||||| || Sbjct 2615739 TCGTGATCTCTTCTACGCTCTCTGGACTCCGGACCTCTTCATGAAGCGTGTCGAGGCGAA 2615680 Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGA 94355 | | ||||| || || || ||||| || Sbjct 2615679 CGGTGACTGGACACTGTTCTGCCCCAACGA 2615650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722995926680