Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1 194 2e-44
>seq1
Length=6618042
Score = 194 bits (214), Expect = 2e-44
Identities = 426/630 (68%), Gaps = 14/630 (2%)
Strand=Plus/Minus
Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792
||||| || |||||| || ||| | || ||| |||||| |||| | || || ||
Sbjct 2616272 TTCAAGACCCTGGAGCGCTCATACTTGCTTCGGATCAATGGCAAGGTTGCGGAACGTCCC 2616213
Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAATGTTTTG 93852
|| || || | ||||| || || | || || ||||| | ||||| ||| || |
Sbjct 2616212 CAGCACATGATTATGCGTGTTGCTGTTGGAATCCACGGTGATGACATTGAGAAGGTCATT 2616153
Query 93853 CGGGCTTTCAGAGACATGCGGGACAAGAGGTAT---AC-CATGGCCACCCCGACCCTGTT 93908
| | | || || || | | ||| ||| || |||| | | || ||||||||
Sbjct 2616152 GAGACGTACA---ACCTGATGTCCCAGAAGTACTTCACTCATG-CTTCTCCAACCCTGTT 2616097
Query 93909 CAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAAGGCCG 93967
|||||| || || || ||| ||| | | || || ||||| | ||| | |||| |
Sbjct 2616096 CAACGCCGGTACTCCTCAGCCGCAGCTCGCCTCCTGCTTCCTCGTCGAC-ATGAAGGAAG 2616038
Query 93968 ACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGG 94027
|| ||| || |||| ||||| |||||| |||||| |||||||| ||| |
Sbjct 2616037 ACAGCATTGAGGGTATTTACGACACTCTCAAGACTTGTGCGCTGATCTCAAAGACCGCTG 2615978
Query 94028 GGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTACATCCGCGGTAC 94085
| || || || ||| ||||| |||| || |||| || ||||||||| |||||
Sbjct 2615977 GTGGTATTGGTCTCAACATCCAC--CGTATCCGCGCCACCGGCTCCTACATCTCTGGTAC 2615920
Query 94086 CAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTA 94145
|||||| | |||||||| | ||||| ||||||||||||||||||||| | || | ||
Sbjct 2615919 CAATGGATCTTCCAACGGAATTGTCCCCATGCTCCGGGTCTTCAACAACACTGCCAGATA 2615860
Query 94146 CGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCA 94205
||| |||||||| || | | | ||| ||||||| |||| || ||||| |||||
Sbjct 2615859 CGTCGACCAGGGAGGAAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCTTGGCA 2615800
Query 94206 CGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGC 94265
| | || | | ||| | || || || |||||||||||||| || | || ||
Sbjct 2615799 CTCTGATATCTTCGACTTCTTGGATCTTCGCAAGAACCACGGCAAGGAAGAAGTTAGAGC 2615740
Query 94266 CAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAA 94325
| || |||||||||||||||||| || ||||| || ||||| || |||||| ||
Sbjct 2615739 TCGTGATCTCTTCTACGCTCTCTGGACTCCGGACCTCTTCATGAAGCGTGTCGAGGCGAA 2615680
Query 94326 CTCCGCCTGGAGTCTTTTTTGTCCCAATGA 94355
| | ||||| || || || ||||| ||
Sbjct 2615679 CGGTGACTGGACACTGTTCTGCCCCAACGA 2615650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722995926680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |