Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2 205 9e-48
seq3 109 5e-19
seq7 89.7 5e-13
>seq2
Length=4789688
Score = 205 bits (226), Expect = 9e-48
Identities = 362/523 (69%), Gaps = 25/523 (5%)
Strand=Plus/Minus
Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383
|| || ||| | ||||| |||||| ||||||| || |||||||| || |||| |
Sbjct 2859950 GTTCCTTGCATCCGCAAGAAGGCTGAGTGGGCCATCAAGTGGATTCAG---GACAAGGAG 2859894
Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442
|||| | || |||| | || ||||||||| || |||||| | || || ||||||
Sbjct 2859893 TCCACCTTTGCTCAGCGTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGC 2859834
Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502
|||||| | ||||| | | || | | || | ||||| || || || ||| |
Sbjct 2859833 TCCTTTGCTTCGATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCC 2859774
Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556
|||||| |||| || || || || || |||||||| |||||||| || || || |
Sbjct 2859773 AACGAGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTTGCTTGTCTGCTGTTCTCC 2859714
Query 52557 TACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAG 52616
|| | | | | || | || |||| ||| || ||| ||| ||
Sbjct 2859713 CACCTCAACCACC-GCCCTAGCAAGGAGATTG--------TCCAGAACATCATCACCGAC 2859663
Query 52617 GCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATG 52676
|| || || ||||| ||||||| | |||| || ||||| ||| | ||||| ||||||
Sbjct 2859662 GCCGTCGCGATCGAGCAGGAGTTCCTGACGGATGCTCTGCCCGTCAACCTGCTTGGCATG 2859603
Query 52677 AACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC 52736
||||| || ||||||| ||||||||||||| || || || || || | ||| ||||
Sbjct 2859602 AACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGACTTCTCGTG--GCTC 2859545
Query 52737 G-GGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGC 52794
|||| | | ||||||| |||||| |||||| || || || ||| ||||||| ||||
Sbjct 2859544 TTGGCAACAAGAAGTACTACAACGCCACCAATCCCTTCGACTTCATGGACAACATCTCGC 2859485
Query 52795 TTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
| |||||||||||||| ||||||||||| ||||| || ||
Sbjct 2859484 TGTCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 2859442
>seq3
Length=4355815
Score = 109 bits (120), Expect = 5e-19
Identities = 136/183 (74%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| ||| || |||||||| || ||||| | |||
Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| |||||||| |||||||| || ||||| || ||||| ||| | || | || | |||
Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC-CTGAATCTTGGCCTTGACGTTG 2043609
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 2043610 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 2043668
Query 138603 AAA 138605
||
Sbjct 2043669 GAA 2043671
>seq7
Length=1958609
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||| |||||||| || || || ||||| || || ||||| |
Sbjct 430743 GACTCCTTCTGAATATTGTAGTCTGACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCG 430802
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| |||||||| || ||||| || ||||| |||||| || |
Sbjct 430803 AAGATAAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTTCACG 430862
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||| || | ||| || || |||| || | || || || || || || ||
Sbjct 430863 TTATCGATGGTATCTGACGATTCGACTTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTG 430922
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 430923 ACGAAAATCTGCAT 430936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262195291760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |