Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 172 7e-38
seq2 154 2e-32
>seq1
Length=6618042
Score = 172 bits (190), Expect = 7e-38
Identities = 419/624 (67%), Gaps = 12/624 (2%)
Strand=Plus/Plus
Query 116663 TTGTG-TAGAGGGCCTCAAACTCTTCACCC-ACAGCCTCTGAGAGCCCTGGTGCCTTATC 116720
||||| || || ||||| ||||| || || ||| | || | ||| || || |||| |
Sbjct 2615596 TTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACA-CATCAGCGAGGCCAGGAGCCTCGTT 2615654
Query 116721 TGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 116780
|| ||||| || | ||| | ||| | |||| || ||||||||||||||||| || |
Sbjct 2615655 GGGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGT 2615714
Query 116781 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAA 116840
|||||| || |||||||||| ||| | | ||||||| | || || || || |
Sbjct 2615715 CCAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAG 2615774
Query 116841 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTT 116900
||||| ||||| | |||||| | |||||| || |||||||| | |||| | ||
Sbjct 2615775 ATCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGG 2615834
Query 116901 GCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957
||| || |||||| || || || || || ||| || || || ||||| ||
Sbjct 2615835 GCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGG 2615894
Query 116958 AATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACA 117015
| || || | || ||||| || || || || ||| | | |||| | || |
Sbjct 2615895 GACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCC--GGTGGCGCGGATA 2615952
Query 117016 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGA 117075
|||||||| | ||||||||| || || ||||||||| | || || | |||||
Sbjct 2615953 CGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGA 2616012
Query 117076 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 117135
|| |||| || || || || ||| |||| | ||| |||||||||| | |
Sbjct 2616013 GTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGC 2616072
Query 117136 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TG 117194
|| ||| || ||||| |||||||| |||||||| | || || |||| ||| | ||
Sbjct 2616073 TGCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAA-GTACTTCTG 2616131
Query 117195 GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254
||||||| | ||| ||||| | ||| |||||| || ||||| || || | |
Sbjct 2616132 GGACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAACAGC 2616191
Query 117255 GACCCGCATAAACATGTATTGGGG 117278
|| ||||||| ||||| |||||
Sbjct 2616192 AACACGCATAATCATGTGCTGGGG 2616215
>seq2
Length=4789688
Score = 154 bits (170), Expect = 2e-32
Identities = 162/210 (77%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| |||||||| ||||| ||||| || || || |||||| |||||
Sbjct 2859729 AGCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACC 2859788
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||| ||||| |||||||||| |||||| |||| | ||| ||||| |||||||||||
Sbjct 2859789 AGGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGAT 2859848
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGT-ATC 127695
||||||||| ||||| |||| ||||||| ||||||| ||||| |||| |
Sbjct 2859849 GCCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGG---TGGACTCCTTGTCCTG 2859905
Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTT 127725
|| |||||| || ||||||| ||||| ||
Sbjct 2859906 AATCCACTTGATGGCCCACTCAGCCTTCTT 2859935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506946928280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |