Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2 179 6e-40
seq1 118 2e-21
>seq2
Length=4789688
Score = 179 bits (198), Expect = 6e-40
Identities = 337/495 (68%), Gaps = 3/495 (1%)
Strand=Plus/Plus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||||||||| |||||||||||||| || || || |||||||| |||| || ||
Sbjct 2859456 CTTCTCGAAGAAGTTGGTCTTGCCGGACAGCGAGATGTTGTCCATGAAGTCGAAGGGATT 2859515
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| ||| ||| |||| || |||||| | || | | ||| || || || ||
Sbjct 2859516 GGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGCCACGAGAAGTCGGTCAGCGACGAACTC 2859575
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
|||||| ||||| ||| ||| || || ||||| | ||||| || || ||||
Sbjct 2859576 GATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGGTTGACGGGCAGAGCATCCGT 2859635
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888
||| ||||||| ||| ||| |||| || ||||| | || | | |||| || | |
Sbjct 2859636 CAGGAACTCCTGCTCGATCGCGACGGCGTCGGTGATGATGTTCTGGACAATCTCCTTGCT 2859695
Query 159889 CGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTC 159948
|| || || ||| ||||| || || ||||||||| |||||| |||||
Sbjct 2859696 AGG---GCGGTGGTTGAGGTGGGAGAACAGCAGACAAGCAAAGTCGGTGTGCAGACCCTC 2859752
Query 159949 GTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAG 160008
|| |||||||| | ||||||||| | | |||| || ||||| | |||||| || ||
Sbjct 2859753 ATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGACCACGCTTCTTCAG 2859812
Query 160009 CCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCAC 160068
||| || || | ||||| | ||| || ||||| |||||||| || || || || ||
Sbjct 2859813 CCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGATGCCCTCCACAGCGGCGAAGGCAAC 2859872
Query 160069 GAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTT 160128
||| | || | |||| | || | |||| || ||||| | ||||||| ||||||||
Sbjct 2859873 GAGACGCTGAGCAAAGGTGGACTCCTTGTCCTGAATCCACTTGATGGCCCACTCAGCCTT 2859932
Query 160129 CTTTGCGATGCACGG 160143
||| |||||| ||
Sbjct 2859933 CTTGCGGATGCAAGG 2859947
>seq1
Length=6618042
Score = 118 bits (130), Expect = 2e-21
Identities = 445/687 (65%), Gaps = 12/687 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897
|| |||||| || |||||||| || | | ||||| | | | | || ||||||||||
Sbjct 2614398 CTGGTCCACAGTAAACTGAATTGGAGCGGA-GGCAGCCATAGTACGAAGGTAGTACATGC 2614456
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
| ||||| || ||| ||| |||||| | ||||||| | | |||| || | |
Sbjct 2614457 CAGTCTTCAGACCCATCTTCCACCCAGCGAAGTGCATGCTGGTAATCTTGCCCATAGTAG 2614516
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017
| || |||||||||||| |||||||| ||||||||||| | | || || || |
Sbjct 2614517 GCTCCTTCATGTGAATGTTGAGAGACTGAGACTGGTCGATGAACGCACCACGGTCAGCAG 2614576
Query 204018 CCAT---ATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074
|||| | ||| |||| |||||| ||||||||||| |||||| | | | | ||
Sbjct 2614577 CCATCTGAAGGAT-ATGG--CGCTGCGAGATCTCCCACACTGTCTTGTAGAGGGCCTTGA 2614633
Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133
||| | ||| | | | | || ||| || || || ||||| || | | ||
Sbjct 2614634 TGTCTGCAGGGATGT-TGGGAATGTTCTGAATAGAACCACCTTCGGCAATGATACGGTTC 2614692
Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | || ||| | ||| | || || ||| | ||| ||||||||
Sbjct 2614693 TTCATGTTGTCAGACCAGAGGCCAAGGTCGACAAGATCCTTGAGCAGCCAGGGGTTGACA 2614752
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| || || || |||| || || | |||| | | ||| |||| | || |||||
Sbjct 2614753 ACTTGGAACTCGCCGGCAAGAACACGACGGGAATAGATGTTCGAGGTGTAGGGCTCGAAG 2614812
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
|| || ||||| |||||| |||||| || |||||||| ||||||| ||||| |
Sbjct 2614813 CATTCATTAAAGCCGAGGATCTGACTGGTGCTCGCAGTGGGCATAGGAGCCACGAGCAAG 2614872
Query 204314 GAGTTGCGCACACCGTATTTTTGGA-CCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372
|||||| ||||||| || || | | || |||||| ||| |||| || | |
Sbjct 2614873 CTGTTGCGGACACCGTGCTTGGCGATCTCAGC-CTTCAGCGAGCTCCAATCCCAGAGGTC 2614931
Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432
| |||| || | |||||||||| |||| | || || || |||||| ||| |
Sbjct 2614932 AGTGGGAGTCCTGTCCCACATGTCATACTGGAGAATTCCCTGGGAGACTGGCGAGCCTTC 2614991
Query 204433 GTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATA 204492
|| ||| ||| | || || | |||| || | ||| |||| | ||| |
Sbjct 2614992 ATATGTCTCATACGTGCCATGCTGCTTGGCCAACTCGACCGACGCGGTGAGGGCACCGTG 2615051
Query 204493 GTACATGGTCTCAAAGATCTGAACGTT 204519
||| || ||||| |||||||||| |||
Sbjct 2615052 GTAGATAGTCTCGAAGATCTGAATGTT 2615078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154871998480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |