Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 1e-11 >seq5 Length=3167764 Score = 87.8 bits (96), Expect = 1e-11 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 671660 GAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTATTAAAACT 671719 ||||| |||||||| | ||||| |||||||| ||| | ||| | || || | || || Sbjct 1278497 GAATTCTTCTTCCACGCTATGGCTGGTCGTGAGGGTCTCATTGACACTGCAGTGAAGACC 1278556 Query 671720 GCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATCA--AACAAG 671777 || || |||||||||||||||||||| || ||||| || ||||| ||| |||| Sbjct 1278557 GCAGAGACTGGTTATATTCAAAGAAAGCTGGTTAAGGCTCTGGAAGAGGTCATGGTCAAG 1278616 Query 671778 AATATGATGGTACAGT 671793 ||||| |||||||| Sbjct 1278617 --TATGACGGTACAGT 1278630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780820762431298