Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 392 4e-104 seq9 150 2e-31 seq2 149 8e-31 seq1 96.9 4e-15 >seq3 Length=4355815 Score = 392 bits (434), Expect = 4e-104 Identities = 778/1149 (68%), Gaps = 11/1149 (1%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| | | |||||| || ||||| | || ||||| || || |||||||||||||| Sbjct 1577549 TCACCAGACAGGATGGCAGCCTGGACGGCAGCACCGTAGGCAACAGCCTCATCGGGGTTG 1577608 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||| || | || | | | || || || ||| Sbjct 1577609 ATGGACTTGTTGGGCTCCTT---GTTGAAGAAGTCACCAACGAGGCGCTGGATCTTGGGG 1577665 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || |||||||| | ||||| || | || | || || ||||| | | Sbjct 1577666 ATACGGGTGGAACCACCGACAAGGACGATCTCGTGGACGGAAGCCTTGTCAATCTTGGCG 1577725 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || || || ||||| || ||||| ||||| | |||| || || ||| Sbjct 1577726 TCACGGAGGACACGCTCGACGGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCAGAGCTCC 1577785 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || ||||| |||||||| ||||| || ||||| |||| ||| ||| | | || || || Sbjct 1577786 TCGAAACGAGCACGGGTGATGGAGGTGTAGAAGTCAATGCCCTCGAAGAGGGAGTCGATC 1577845 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || |||| || || || | ||||| | || ||||| || |||||||| || || || Sbjct 1577846 TCGATGGAGGTCTGAGCAGAGGAAGAGAGGGTGCGCTTGGCACGCTCACAAGCAGTGCGG 1577905 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | ||| || || ||||| | ||| || | || ||||| || || || || ||||| Sbjct 1577906 AGACGGCGGAGAGCACGAGCGTTGGTGGTCAGGTCCTTCTTGTGCTTGCGCTTGAACTCG 1577965 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||| | ||||| || |||||||||| ||| || || || Sbjct 1577966 TTGACGAAGTGGTTGACGAGGCGGTTGTCGAAGTCCTCACCACCCAGGTGGGTGTCACCA 1578025 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 || || | ||||| || |||||||| | |||||| | | | || ||||| || ||| Sbjct 1578026 GCAGTAGACTTGACCTCGAAGATACCCTCCTCAATGGTCAGGAGGGAGACATCGAAGGTA 1578085 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 |||||||||||||| || || || ||||| || | || ||||| || |||||| Sbjct 1578086 CCACCACCCAGGTCGAAGATCAGGACGTTGCGCTCACCCTCAGCCTTCTTGTCAAGACCG 1578145 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || |||||||| || || || || || || || ||||| ||| |||||| || ||||| Sbjct 1578146 TAGGCGATAGCGGCTGCAGTGGGCTCGTTGATGATACGCAGAACGTTCAGACCGGCAATG 1578205 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | || || || || || || || || || ||||| ||||| || ||||| || | | Sbjct 1578206 AGACCGGCGTCCTTGGTGGCCTGACGCTGGGAGTCGTTGAAGTAAGCGGGGACAGTGATG 1578265 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| |||| | ||| || || || || ||| | || ||| ||||| || Sbjct 1578266 ACAGCGTTGTTGACGGTGCCACCAAGGTAAGACTCGGCGGTCTCACGCATCTTGGTCAGG 1578325 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 ||||| || || || || || | | ||||| || || || || || || | || || Sbjct 1578326 ACCATGGAGGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCCTTGAACTGGACCTCG 1578385 Query 7850 ATCATGGGTTTATC-CGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 || ||||| || | | | | || ||||| | | | | ||||| ||| | Sbjct 1578386 ATGATGGGCTTGCCATTCTTCTC----GACGACCTTGAATGGGAAGTGCTTCATGTCGGC 1578441 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| ||| | ||||| | |||||| |||||||| || || || || ||||| Sbjct 1578442 CTGGACCTCAGAGTCGGTGAACTTGCGTCCGATGAGACGCTTAGCGTCGAACACAGTGTT 1578501 Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028 ||||||||||||| |||||||| || || || ||||| ||||| || | || Sbjct 1578502 GCTGGGGTTCATGGCAACCTGGTTCTTAGCAGCATCACCGATCAGACGCTC---GGTGTC 1578558 Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || || ||| |||| |||||||| || || || |||||||| ||||| ||||| | Sbjct 1578559 GGTGAAGGCAACGAACGACGGGGTCGTCCGGTTACCCTGGTCGTTGGCAATGATTTCGAT 1578618 Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||| | | |||| || ||||| || ||||| || || | ||| |||||||| || Sbjct 1578619 ACGGTCATCTCTGAAGACACCCACGCAAGAGTACGTGGTACCCAGATCGATACCGATCGC 1578678 Query 8149 TTGAGTCAT 8157 ||| ||| Sbjct 1578679 GGGAGCCAT 1578687 >seq9 Length=1026226 Score = 150 bits (166), Expect = 2e-31 Identities = 361/541 (67%), Gaps = 5/541 (1%) Strand=Plus/Plus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 ||| || ||||| || ||||| || || | | ||| || | |||||| | | ||| Sbjct 309391 CAGATCTTCAAAGCGAGCACGTGTGATCTGAGCGTTGAAGTCCTCACCGTCGAACAGCGA 309450 Query 7303 ATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGC 7362 ||||| || | || || || | | || || || ||||| || |||||||| || Sbjct 309451 GTCAATCTCGACAGTGGTCTGGGTAGCATTGGACAAAGTACGCTTAGCACGCTCACAGGC 309510 Query 7363 CGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTT 7422 || || | |||||| || || | | || || |||| ||| ||||| || |||| Sbjct 309511 AGTGCGCAGACGACGCAGAGCTCTGGAGTCTCCAGAAAGATCCTTCTTGGTCTTCCGTTG 309570 Query 7423 AAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482 ||||| | ||| ||| || || | | || || |||| |||||||||||| || Sbjct 309571 GAACTCCTTCTTGAAATGTTCCAGAAGGTTGGTGTCAAAGTCTTGACCACCCAAGTGCGT 309630 Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542 || || ||||| |||||||| || | |||||| | ||||| | | || ||||| Sbjct 309631 GTCACCGGCGGTGGCTTTGACAGTGAAAACACCTCCCTGGATGTTAAGAAGAGACACATC 309690 Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTT--CTTA 7600 || |||||||| ||||| ||| | || || || ||| || | ||| || | | Sbjct 309691 GAAAGTACCACCTCCCAGATCATAGATCAGGACATTCCGCTCCTTGTCGGACTTGCCGGA 309750 Query 7601 T-CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCA 7658 | | ||||| || ||||| || || || ||||| || || || ||||| || ||| || | Sbjct 309751 TCCCAGACCATAAGCGATGGCAGCAGCGGTTGGCTCGTTGATGATACGGAGCACA-TTGA 309809 Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 |||| ||||| | | || || || || || || || || ||||| || || |||| Sbjct 309810 GGCCGGCAATGGCACCAGCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAATATGCCG 309869 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778 | || || | ||| || | | || ||||| || || | | ||||| | ||||||| Sbjct 309870 GCACAGTAATGACGGCCTTGGAAACCTTCTTTCCAAGCTTAGTCTCCGCTACTTCTTTCA 309929 Query 7779 T 7779 | Sbjct 309930 T 309930 >seq2 Length=4789688 Score = 149 bits (164), Expect = 8e-31 Identities = 456/698 (65%), Gaps = 19/698 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || || || || || || |||| ||| Sbjct 615892 TCAAAGTCCTCACCACCAAGGTGAGTGTCACCGGCAGTAGCCAGAACCTCGAAGACACCG 615833 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573 || ||| | | || ||||| || ||||||||||||||||| || ||||| Sbjct 615832 TTGTCGATGGACAGAAGGGAGACATCGAAAGTACCACCACCCAGGTCGTAAACAATGA-- 615775 Query 7574 ACGTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || | || ||||| |||| || |||||||| || ||||| ||||| || || Sbjct 615774 ----TC-TGGCGCTCGTCACCAGTCTTGTCCAGACCGTAGGCAATAGCTGCCGCGGTAGG 615720 Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || | || |||||| ||| || || || || || | ||||| || || || || Sbjct 615719 CTCGTTCACAACACGAAGGACGTTGAGACCGGCGATGGTACCAGCATCCTTGGTGGCCTG 615660 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || | || || |||||||| ||||| || ||||| |||| | | || ||| || Sbjct 615659 TCTCTGGGCGTCATTGAAGTAGGCAGGGACAGTGACGACGGCGTGCTTAACAGACTTTCC 615600 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGC 7812 ||| || |||||||| || ||||| || ||||||||| | || | ||| |||| Sbjct 615599 GAGGTAGCCCTCCGCGATCTCCTTCATCTTTCCAAGAACCATGGCGGACACCTCCTCAGG 615540 Query 7813 CGCAAACTGTTTCGTTTCAC-CGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC 7871 | || || | | || ||| | ||| || | | | || || || | Sbjct 615539 AGTGAA-GGTCTTGGGAGACTTGTTGACATCGACCTTGACGACAGGCTT---GCCATCCT 615484 Query 7872 CGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACT 7931 | | ||||| | | | | || ||||| ||||| | | ||| | ||| Sbjct 615483 TGTTGGCAACCTGGAAGGGGAAGTTCTTGATATCCCTCTGGACATCCTTGTCATCATACT 615424 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | | || || || ||||| | ||||| | ||| | ||||||||| || ||||| Sbjct 615423 TGCGACCTATCAGTCGCTTGACGTCAAAGATTGTCCTCTTGGGGTTCGAGGAGTATTGGT 615364 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 ||||||| ||||| |||| ||| ||||| | | || || || || || || || || | Sbjct 615363 TCTTCGCGGCGTCACCGACAAGGCGTTCCTCA---TCAGTGAAGGCCACATATGAAGGAG 615307 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | | || || || ||||||||| | | ||| || || | || ||| || |||| Sbjct 615306 TGATACGGTTTCCCTGGTCGTTCACGAGAATCTCGACCTTTCCATTCTGCATAACACCGA 615247 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 | || || || || ||||| | ||||||||||||| || Sbjct 615246 CACAAGAGTAGGTCGTTCCCAGATCAATACCGATTACT 615209 >seq1 Length=6618042 Score = 96.9 bits (106), Expect = 4e-15 Identities = 391/613 (64%), Gaps = 11/613 (2%) Strand=Plus/Plus Query 105466 TATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGA 105525 || || | ||||||| | || ||||| | |||||||| || | || || |||| Sbjct 2615593 TACTTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCG 2615652 Query 105526 TCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGA 105585 | || || |||| || ||| | ||| | | || || || |||||||| | || ||| Sbjct 2615653 TTGGGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGA 2615712 Query 105586 ATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGA 105645 |||| | || | ||||| || ||| || | ||||| | || || ||| ||| Sbjct 2615713 GTCCAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGA 2615772 Query 105646 ATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCT 105705 | || | || |||| ||||| | |||||| || || | |||| || | || || Sbjct 2615773 AGATCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACC- 2615831 Query 105706 TTACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAAC 105759 | | ||| || | || | ||| ||||| || || ||| | || || | | Sbjct 2615832 --AGGGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGC 2615889 Query 105760 ATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGT 105819 || || | ||| || | ||| | |||||| || ||| || | || | || || Sbjct 2615890 ATGGGGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGG 2615949 Query 105820 ACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTT 105879 | | ||| | || | |||||||| ||||| ||| ||| ||||||| || Sbjct 2615950 ATACGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTG 2616009 Query 105880 ACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGAC 105939 | || ||||||||||| || || || |||||||| | | | ||||| || || | Sbjct 2616010 AGAGTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCG 2616069 Query 105940 ATTTGTGGTCTG-GGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACC 105998 | || || ||| || ||||| || |||||||| ||||| | |||||| |||| | Sbjct 2616070 AGCTGCGG-CTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTT 2616128 Query 105999 TTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAAT 106058 | || | | | ||| || || | ||| | ||||| || | || || || |||| Sbjct 2616129 CTGGGACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAAC 2616188 Query 106059 AGCGACGCGCATA 106071 ||| || |||||| Sbjct 2616189 AGCAACACGCATA 2616201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132538007720