Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 161 1e-34 seq2 120 4e-22 seq7 107 2e-18 seq8 87.8 2e-12 seq6 87.8 2e-12 seq12 86.0 7e-12 >seq1 Length=6618042 Score = 161 bits (178), Expect = 1e-34 Identities = 378/565 (67%), Gaps = 13/565 (2%) Strand=Plus/Plus Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG 110574 |||||| ||| | |||| || |||| ||||||||||||| || || |||| | Sbjct 2615593 TACTTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCG 2615652 Query 110575 TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGA 110634 | ||| ||||| || | ||| | || | |||| || | ||||||||| ||||| ||| Sbjct 2615653 TTGGGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGA 2615712 Query 110635 ATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGT 110694 |||| | || |||| || ||||| | | | ||||| | || ||||| ||| Sbjct 2615713 GTCCAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGA 2615772 Query 110695 AGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCC 110754 || ||||| ||||| | |||||| |||||||| || || || |||| ||||| | || Sbjct 2615773 AGATCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACC- 2615831 Query 110755 TTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 | | || || |||||| || || | || ||| |||||||||| |||| Sbjct 2615832 --AGGGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGC 2615889 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGA 110868 || || | |||||| | ||| ||||| ||||| || ||| |||| || Sbjct 2615890 ATGGGGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGG 2615949 Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGT 110927 || |||||| | | |||||||||||| || ||| || | |||| | ||| | Sbjct 2615950 ATACGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCT-T 2616008 Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987 ||| || | |||||||| ||||| ||| |||| || | | || ||||| || | Sbjct 2616009 GAGAGTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGC 2616068 Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047 | ||| || |||| || || || ||||| || || || | |||||| |||| || Sbjct 2616069 GAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAA-GTACT 2616127 Query 111048 T-TGGGACATCTTGTTGTATGTGTC 111071 | ||||||||| |||||| || || Sbjct 2616128 TCTGGGACATCAGGTTGTACGTCTC 2616152 Score = 149 bits (164), Expect = 7e-31 Identities = 342/503 (68%), Gaps = 19/503 (4%) Strand=Plus/Minus Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564 ||| || ||||| || || | ||||| | ||||||| ||| | ||| || | || Sbjct 699631 ATCAAACCGACCGGGTCGCATCAGAGCCTTGTCAAGAACATCTGGTCTGTTCGTTCCAGC 699572 Query 11565 AATGACTACAA--TGC-CAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTT 11621 | ||| || | ||| ||| | ||| ||| |||||||| || ||||| | |||||| Sbjct 699571 GAGGACCACGACTTGCTCAGACG---TGTTGAAGCCGTCCATCTCAGTGAGGATCTGGTT 699515 Query 11622 GATCGTCTGTTCACGCTCATCGTTGGAG--GGCATACCACCTGCCGAACGCTTC--TTAC 11677 | || || ||||| ||||| | | || | | | || | | || |||| Sbjct 699514 CAGTGTACTCTCCCGCTCGTCGTTACCGCCGCCAAAACTC-TGTTTAGCTCTCGATTTAC 699456 Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGA 11737 ||| ||||| || ||||||||||||| ||||| || ||| || || | ||| Sbjct 699455 CGATGGCGTCGATTTCATCGATGAATATAATACAGGGAGTGTTCTTCCGGGCGTTGGCGA 699396 Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG 11797 | || ||||| |||||| | || ||||| ||||||||||||||||| || | || | Sbjct 699395 ACAGATCACGGACACGCGATGGACCGACACCGACGAACATCTCAACGAA-TTCGGAGCCG 699337 Query 11798 --AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 |||||||| ||||||||| || |||||||| | || ||||| |||||||| Sbjct 699336 CTGACACTGAA-GAAGGGAACTCCGGATTCACCAGCCGTTGCCTTTGCGAGCAGAGTCTT 699278 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCCA 11913 ||| ||||| || | || | ||||| || || ||||| ||||||||||| |||| Sbjct 699277 ACCGGTACCCGGAGGCCCTGAGAGAATAGCACCGCGGGGAATCTTGGCACCGAGCTTC-- 699220 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAG 11973 | | |||| |||| ||| |||||| |||| |||| | |||| ||||||| | Sbjct 699219 TGGAACTGCTCCGGCTGCTTCAGGAAGCTGACAAACTCCATGATTTCCACCTTGGCCTCG 699160 Query 11974 TCGATACCCTCAACATCGGTGAA 11996 || || || | || |||| ||| Sbjct 699159 TCCATGCCTGCGACGTCGGAGAA 699137 >seq2 Length=4789688 Score = 120 bits (132), Expect = 4e-22 Identities = 329/494 (67%), Gaps = 9/494 (2%) Strand=Plus/Plus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 |||||||| || | ||| |||||||| || ||||| || || |||||||| ||||| Sbjct 2859442 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGACAGCGAGATGTTGTCCATG 2859501 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || ||||| ||| ||| || | | | |||| |||| ||||| || Sbjct 2859502 AAGTCGAAGGGATTGGTGGCGTTGTAGTACTTCTTGTTG-CCAAGAGCCACGAGAAGTCG 2859560 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 || | ||| ||||||| || | | |||| | | ||||| || | || || | Sbjct 2859561 GTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGGTTG-A 2859619 Query 119387 CGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445 |||| |||||||| | ||| | || ||||||| | || || || | | |||| | Sbjct 2859620 CGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGCGTCGGTGATGATGTTCT 2859679 Query 119446 GAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCTT 119505 | | | | || | || || | | | | |||| | ||||| || Sbjct 2859680 GGACAATCTCCTTGCTAGGGCGGTGGTTGAGGTGGGAGAACAGCAGACAAGCAAAGTCGG 2859739 Query 119506 GATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTC 119565 || || || ||||| |||||||| ||||| || |||| || |||||||| || | Sbjct 2859740 TGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGAC 2859799 Query 119566 CTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACAC 119625 | | ||||| ||||| ||||| | | ||| || || |||||||||||||||||| Sbjct 2859800 CACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGATGCCCTCCACAG 2859859 Query 119626 AGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC--GAA-CCACTTGAGA 119681 |||||| || | ||||||| ||| |||||| || |||||| ||| |||||||| Sbjct 2859860 CGGCGAAGGCAACGAGACGCTGAGC-AAAGGTGGACTCCTTGTCCTGAATCCACTTGATG 2859918 Query 119682 GCCCAGTTGGCCTT 119695 ||||| | ||||| Sbjct 2859919 GCCCACTCAGCCTT 2859932 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 3048054 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 3047995 Query 136777 GGGAACAGCT 136786 |||| || || Sbjct 3047994 GGGACCATCT 3047985 >seq7 Length=1958609 Score = 107 bits (118), Expect = 2e-18 Identities = 218/324 (67%), Gaps = 0/324 (0%) Strand=Plus/Minus Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735 ||| | ||| || | ||||||||||| | |||| || || || || ||||| | Sbjct 856028 ACCAATAGCATCCAGTTCATCGATGAAAATGATAGCAGGCGCCTTAGCGCGAGCCTGAGC 855969 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| || ||||| |||||||| || |||||||| ||| | | ||| |||| | | | Sbjct 855968 GAACAGCTCACGGACACGCTTGGCACCAACACCGACGTAGACTTCATCGAATTCAGATCC 855909 Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 ||| | | ||| |||||| || || ||||||| ||| ||||| || | ||||| Sbjct 855908 AGACATGTAGAAGAACGGAACACCAGCTTCTCCAGCGACGGCACGAGCCAGCAAGGTCTT 855849 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAA 11915 || |||||||| | ||| |||| || | || ||| | |||| |||| | Sbjct 855848 TCCAGTACCAGGAGGACCGACGAGCAGCACACCCTTGGGCAGCTTGCCACCTAGGGTGGA 855789 Query 11916 GTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTC 11975 | | ||||| || ||| || || || || | |||| ||||| |||||||| ||| Sbjct 855788 GAATCGCTCCGGGTTCAGCAGAAATTCGACCAGTTCCTGCAGTTCATCCTTGGCTTCGTC 855729 Query 11976 GATACCCTCAACATCGGTGAAACG 11999 | || | |||||| ||||||| Sbjct 855728 GCACCCGTGCACATCGCTGAAACG 855705 >seq8 Length=1356063 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 418226 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 418285 Query 136777 GGGAACAGCTTTT 136789 |||| || |||| Sbjct 418286 GGGACCATTTTTT 418298 >seq6 Length=3125892 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 3036846 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 3036905 Query 136777 GGGAACAGCTTTT 136789 |||| || |||| Sbjct 3036906 GGGACCATTTTTT 3036918 >seq12 Length=263740 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 240276 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 240217 Query 136777 GGGAACA 136783 |||| || Sbjct 240216 GGGACCA 240210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975757047400