Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 1e-34
seq2 120 4e-22
seq7 107 2e-18
seq8 87.8 2e-12
seq6 87.8 2e-12
seq12 86.0 7e-12
>seq1
Length=6618042
Score = 161 bits (178), Expect = 1e-34
Identities = 378/565 (67%), Gaps = 13/565 (2%)
Strand=Plus/Plus
Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG 110574
|||||| ||| | |||| || |||| ||||||||||||| || || |||| |
Sbjct 2615593 TACTTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCG 2615652
Query 110575 TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGA 110634
| ||| ||||| || | ||| | || | |||| || | ||||||||| ||||| |||
Sbjct 2615653 TTGGGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGA 2615712
Query 110635 ATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGT 110694
|||| | || |||| || ||||| | | | ||||| | || ||||| |||
Sbjct 2615713 GTCCAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGA 2615772
Query 110695 AGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCC 110754
|| ||||| ||||| | |||||| |||||||| || || || |||| ||||| | ||
Sbjct 2615773 AGATCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACC- 2615831
Query 110755 TTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808
| | || || |||||| || || | || ||| |||||||||| ||||
Sbjct 2615832 --AGGGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGC 2615889
Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGA 110868
|| || | |||||| | ||| ||||| ||||| || ||| |||| ||
Sbjct 2615890 ATGGGGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGG 2615949
Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGT 110927
|| |||||| | | |||||||||||| || ||| || | |||| | ||| |
Sbjct 2615950 ATACGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCT-T 2616008
Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987
||| || | |||||||| ||||| ||| |||| || | | || ||||| || |
Sbjct 2616009 GAGAGTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGC 2616068
Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047
| ||| || |||| || || || ||||| || || || | |||||| |||| ||
Sbjct 2616069 GAGCTGCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAA-GTACT 2616127
Query 111048 T-TGGGACATCTTGTTGTATGTGTC 111071
| ||||||||| |||||| || ||
Sbjct 2616128 TCTGGGACATCAGGTTGTACGTCTC 2616152
Score = 149 bits (164), Expect = 7e-31
Identities = 342/503 (68%), Gaps = 19/503 (4%)
Strand=Plus/Minus
Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564
||| || ||||| || || | ||||| | ||||||| ||| | ||| || | ||
Sbjct 699631 ATCAAACCGACCGGGTCGCATCAGAGCCTTGTCAAGAACATCTGGTCTGTTCGTTCCAGC 699572
Query 11565 AATGACTACAA--TGC-CAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTT 11621
| ||| || | ||| ||| | ||| ||| |||||||| || ||||| | ||||||
Sbjct 699571 GAGGACCACGACTTGCTCAGACG---TGTTGAAGCCGTCCATCTCAGTGAGGATCTGGTT 699515
Query 11622 GATCGTCTGTTCACGCTCATCGTTGGAG--GGCATACCACCTGCCGAACGCTTC--TTAC 11677
| || || ||||| ||||| | | || | | | || | | || ||||
Sbjct 699514 CAGTGTACTCTCCCGCTCGTCGTTACCGCCGCCAAAACTC-TGTTTAGCTCTCGATTTAC 699456
Query 11678 CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGA 11737
||| ||||| || ||||||||||||| ||||| || ||| || || | |||
Sbjct 699455 CGATGGCGTCGATTTCATCGATGAATATAATACAGGGAGTGTTCTTCCGGGCGTTGGCGA 699396
Query 11738 AAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAG 11797
| || ||||| |||||| | || ||||| ||||||||||||||||| || | || |
Sbjct 699395 ACAGATCACGGACACGCGATGGACCGACACCGACGAACATCTCAACGAA-TTCGGAGCCG 699337
Query 11798 --AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855
|||||||| ||||||||| || |||||||| | || ||||| ||||||||
Sbjct 699336 CTGACACTGAA-GAAGGGAACTCCGGATTCACCAGCCGTTGCCTTTGCGAGCAGAGTCTT 699278
Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCCA 11913
||| ||||| || | || | ||||| || || ||||| ||||||||||| ||||
Sbjct 699277 ACCGGTACCCGGAGGCCCTGAGAGAATAGCACCGCGGGGAATCTTGGCACCGAGCTTC-- 699220
Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAG 11973
| | |||| |||| ||| |||||| |||| |||| | |||| ||||||| |
Sbjct 699219 TGGAACTGCTCCGGCTGCTTCAGGAAGCTGACAAACTCCATGATTTCCACCTTGGCCTCG 699160
Query 11974 TCGATACCCTCAACATCGGTGAA 11996
|| || || | || |||| |||
Sbjct 699159 TCCATGCCTGCGACGTCGGAGAA 699137
>seq2
Length=4789688
Score = 120 bits (132), Expect = 4e-22
Identities = 329/494 (67%), Gaps = 9/494 (2%)
Strand=Plus/Plus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|||||||| || | ||| |||||||| || ||||| || || |||||||| |||||
Sbjct 2859442 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGACAGCGAGATGTTGTCCATG 2859501
Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAG-ATTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326
||||| || ||||| ||| ||| || | | | |||| |||| ||||| ||
Sbjct 2859502 AAGTCGAAGGGATTGGTGGCGTTGTAGTACTTCTTGTTG-CCAAGAGCCACGAGAAGTCG 2859560
Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386
|| | ||| ||||||| || | | |||| | | ||||| || | || || |
Sbjct 2859561 GTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGGTTG-A 2859619
Query 119387 CGGG-AGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445
|||| |||||||| | ||| | || ||||||| | || || || | | |||| |
Sbjct 2859620 CGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGCGTCGGTGATGATGTTCT 2859679
Query 119446 GAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACGGCAAATTCTT 119505
| | | | || | || || | | | | |||| | ||||| ||
Sbjct 2859680 GGACAATCTCCTTGCTAGGGCGGTGGTTGAGGTGGGAGAACAGCAGACAAGCAAAGTCGG 2859739
Query 119506 GATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTC 119565
|| || || ||||| |||||||| ||||| || |||| || |||||||| || |
Sbjct 2859740 TGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGAC 2859799
Query 119566 CTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACAC 119625
| | ||||| ||||| ||||| | | ||| || || ||||||||||||||||||
Sbjct 2859800 CACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGATGCCCTCCACAG 2859859
Query 119626 AGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC--GAA-CCACTTGAGA 119681
|||||| || | ||||||| ||| |||||| || |||||| ||| ||||||||
Sbjct 2859860 CGGCGAAGGCAACGAGACGCTGAGC-AAAGGTGGACTCCTTGTCCTGAATCCACTTGATG 2859918
Query 119682 GCCCAGTTGGCCTT 119695
||||| | |||||
Sbjct 2859919 GCCCACTCAGCCTT 2859932
Score = 86.0 bits (94), Expect = 7e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||| ||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 3048054 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 3047995
Query 136777 GGGAACAGCT 136786
|||| || ||
Sbjct 3047994 GGGACCATCT 3047985
>seq7
Length=1958609
Score = 107 bits (118), Expect = 2e-18
Identities = 218/324 (67%), Gaps = 0/324 (0%)
Strand=Plus/Minus
Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735
||| | ||| || | ||||||||||| | |||| || || || || ||||| |
Sbjct 856028 ACCAATAGCATCCAGTTCATCGATGAAAATGATAGCAGGCGCCTTAGCGCGAGCCTGAGC 855969
Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795
||| || ||||| |||||||| || |||||||| ||| | | ||| |||| | | |
Sbjct 855968 GAACAGCTCACGGACACGCTTGGCACCAACACCGACGTAGACTTCATCGAATTCAGATCC 855909
Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855
||| | | ||| |||||| || || ||||||| ||| ||||| || | |||||
Sbjct 855908 AGACATGTAGAAGAACGGAACACCAGCTTCTCCAGCGACGGCACGAGCCAGCAAGGTCTT 855849
Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAA 11915
|| |||||||| | ||| |||| || | || ||| | |||| |||| |
Sbjct 855848 TCCAGTACCAGGAGGACCGACGAGCAGCACACCCTTGGGCAGCTTGCCACCTAGGGTGGA 855789
Query 11916 GTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTC 11975
| | ||||| || ||| || || || || | |||| ||||| |||||||| |||
Sbjct 855788 GAATCGCTCCGGGTTCAGCAGAAATTCGACCAGTTCCTGCAGTTCATCCTTGGCTTCGTC 855729
Query 11976 GATACCCTCAACATCGGTGAAACG 11999
| || | |||||| |||||||
Sbjct 855728 GCACCCGTGCACATCGCTGAAACG 855705
>seq8
Length=1356063
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||| ||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 418226 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 418285
Query 136777 GGGAACAGCTTTT 136789
|||| || ||||
Sbjct 418286 GGGACCATTTTTT 418298
>seq6
Length=3125892
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||| ||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 3036846 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 3036905
Query 136777 GGGAACAGCTTTT 136789
|||| || ||||
Sbjct 3036906 GGGACCATTTTTT 3036918
>seq12
Length=263740
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||| ||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 240276 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 240217
Query 136777 GGGAACA 136783
|||| ||
Sbjct 240216 GGGACCA 240210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975757047400
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