Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 3e-36
seq2 109 6e-19
>seq1
Length=6618042
Score = 167 bits (184), Expect = 3e-36
Identities = 414/624 (66%), Gaps = 12/624 (2%)
Strand=Plus/Plus
Query 106695 TTGTG-TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753
||||| || || || || |||||||| || | | || | ||| || || |||| ||
Sbjct 2615596 TTGTGGTAAAGAGCCTCGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTG 2615655
Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813
|| ||||| || | ||| | ||| | |||| || ||||||||||| ||||| ||| ||
Sbjct 2615656 GGGCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTC 2615715
Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873
|| || | | |||||||| | | | | | ||||| | || ||||| || |
Sbjct 2615716 CAGAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGA 2615775
Query 106874 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 106933
|| | ||| || | |||||| | |||||| ||||| || |||| |||| || ||
Sbjct 2615776 TCCAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACC---A 2615832
Query 106934 CGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987
| ||| || | || | || || | || ||| ||| || || || |||||
Sbjct 2615833 GGGCGCTTGTTTCCTCCCTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATG 2615892
Query 106988 GGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 107047
|| | ||| || | || ||||| || || || || |||| | | |
Sbjct 2615893 GGGACAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATA 2615952
Query 107048 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 107107
||||||| | |||||||| ||||| ||||||||| ||||||| | | |||
Sbjct 2615953 CGGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGA 2616012
Query 107108 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 107167
|| | || ||||| | || ||| ||||| || ||| |||||||| || | |
Sbjct 2616013 GTGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGC 2616072
Query 107168 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TG 107226
||||| || ||||| || ||||| |||||||| | || ||| |||| ||| | ||
Sbjct 2616073 TGCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAA-GTACTTCTG 2616131
Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286
||||||| || ||| ||||| | ||| |||||||| || |||||||| || | ||
Sbjct 2616132 GGACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGATTCCAACAGC 2616191
Query 107287 CACACGCATAAACATGTATTGGGG 107310
|||||||||| ||||| |||||
Sbjct 2616192 AACACGCATAATCATGTGCTGGGG 2616215
Score = 102 bits (112), Expect = 1e-16
Identities = 128/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528
|| ||||| ||||| ||||| ||| || | | ||||| | ||| || || ||
Sbjct 2615320 GAGGCCAAGTTGCAGACAGCAACCTCGTCAGGGGCGCTATACTCGATAATCTCAGTGCAG 2615379
Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588
| |||||| || || || |||| ||||| ||||| ||||| ||||||| ||||||
Sbjct 2615380 AGGTTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAAGCATCC 2615439
Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644
||||| |||||| | || || || ||||||||||| | || |||||| || | |||
Sbjct 2615440 TTGTACAGCATGAATGGGGTTCCGGTCTCCGTCTGCGCCTCGAGAATGGCGTACCA 2615495
>seq2
Length=4789688
Score = 109 bits (120), Expect = 6e-19
Identities = 152/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| ||||||||||| || || || || || || |||||| || ||
Sbjct 2859730 GCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCA 2859789
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392
||||| ||||| |||||||||| ||| | || | ||| || || ||||||||||||||
Sbjct 2859790 GGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCA-AAGGAGCCGGAGAAGAAGAT 2859848
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451
||||||||| || || |||| || |||| || |||| | || | |||| | ||
Sbjct 2859849 GCCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGGTG-GACTCCTTGTCCTGAA 2859907
Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTT 117479
||| || || ||||| | ||||||||
Sbjct 2859908 TCCACTTGATGGCCCACTCAGCCTTCTT 2859935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980556632920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |