Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq7 91.5 1e-13
>seq7
Length=1958609
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| ||| | ||||| || ||||| || || ||||| || || | || | || ||
Sbjct 430499 AACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGAGAGCGTGCGACCGTCCTC 430558
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
||||| || || || || || | || ||||||||| | || | |||||||||||
Sbjct 430559 AAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTG 430618
Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951
||||| || ||| | || | ||| | ||| || || | || ||||| ||
Sbjct 430619 GATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGCTCTCGACCTCCAGCGTAATGGTCTT 430678
Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||| || ||||||||||| |||||||||||
Sbjct 430679 TCCGGTCAGAGTCTTCACGAAGATCTGCAT 430708
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||| ||||||||||| |||||| | || |||| || ||||| || ||
Sbjct 430968 GTGCTCTCCTTCTGGATGTTATAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCT 431027
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
|| || || || || ||||||||| | || | ||||||||||| ||||| |||
Sbjct 431028 GCGAAGATCAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 431087
Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
||| | || | || | | ||| || || | ||| || || || || ||||| |||
Sbjct 431088 ACGTTGTCGATGGTGTCGCTCGACTCCACCTCCAGGGTGATAGTCTTGCCGGTGAGGGTC 431147
Query 34965 TTCAC 34969
|| ||
Sbjct 431148 TTGAC 431152
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/196 (70%), Gaps = 10/196 (5%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| |||||||| || ||||| || | | | || |||| |||||||| || || || ||
Sbjct 430746 TCCTTCTGAATATTGTAGTCTGACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAG 430805
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG--- 34907
|| || || |||||||| | || | ||||||||||| || ||| || |||
Sbjct 430806 ATAAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATTTTCGACTTCACGTTA 430865
Query 34908 --GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965
|||| |||| | || | || || |||| ||| ||||| ||||| ||||| ||||
Sbjct 430866 TCGATGGTATC---TGAC--GATTCGACTTCGAGGGTAATGGTCTTTCCGGTGAGGGTCT 430920
Query 34966 TCACAAAGATCTGCAT 34981
| || || ||||||||
Sbjct 430921 TGACGAAAATCTGCAT 430936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633469436424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |