Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-13 >seq2 Length=4789688 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 |||| || ||| ||||| || || || ||||| || | | |||| || || || Sbjct 2859718 AACAGCAGACAAGCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 2859777 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | |||||||||||| || | || || | |||||| || |||||||| || || Sbjct 2859778 AAGGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCG 2859837 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 || ||||| || || || || || || || ||||| || | | || | | | || Sbjct 2859838 GAGAAGAAGATGCCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGGTGGACTCC 2859897 Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTT 19169 || | |||||||| || | ||||| ||||||||||| Sbjct 2859898 TTGTCCTGAATCCACTTGATGGCCCACTCAGCCTTCTT 2859935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108568130120