Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2 165 2e-35
>seq2
Length=4789688
Score = 165 bits (182), Expect = 2e-35
Identities = 353/519 (68%), Gaps = 15/519 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || || ||||||||| ||
Sbjct 2859438 CTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGACAGCGAGATGTTGTC 2859497
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| |||||| |||| | ||| || | | ||| ||| | | ||
Sbjct 2859498 CATGAAGTCGAAGGGATTGGTGGCGTTGTAGTACTTCTTGTT--GCCAAGAGCCACGAGA 2859555
Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
|| | || |||||| |||||||||| | ||||||| || ||||||||| | |||
Sbjct 2859556 AGTCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGG 2859615
Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||||||| ||| | || || ||||||| ||| ||| ||||| || | ||
Sbjct 2859616 TTGACGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGCGTCGGTGATGATG 2859675
Query 48077 TGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
| || || || || || | | |||| ||||| || | |||| ||
Sbjct 2859676 TTCTGGACAATCTCCTTGCTAGGGCGGTGGTTG---AGGTG---GGAGAACAGCAGACAA 2859729
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|||||||| |||||| || || || || ||| ||| ||||||||||| |||||||
Sbjct 2859730 GCAAAGTCGGTGTGCAGACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCA 2859789
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
||||| | || | || || |||||||| || | || || ||||| ||||||||||||
Sbjct 2859790 GGCATCAGACCACGCTTCTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGATG 2859849
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGT-CTGAGAT 48312
|||||||| || ||||| || ||| | || | || | | | ||||| |||| ||
Sbjct 2859850 CCCTCCACAGCGGCGAAGGCAACGAGACGCTGAGCAAAGGTGGACTCCTTGTCCTGA-AT 2859908
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||| | ||||| || |||||||| |||||| ||
Sbjct 2859909 CCACTTGATGGCCCACTCAGCCTTCTTGCGGATGCAAGG 2859947
Score = 87.8 bits (96), Expect = 3e-12
Identities = 171/251 (68%), Gaps = 5/251 (2%)
Strand=Plus/Plus
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
|||| ||||| | ||||| || ||||||||| || |||||| | ||||| |
Sbjct 2860077 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCGGGGA 2860136
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
|||| || || | ||| | ||||| ||| || || ||||| || || || || || |
Sbjct 2860137 CCTGGACCTCCCCGCTGAAGCGCTCCACCAGGTTTTCGTTGACGATTCCGTCGGACGCGG 2860196
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCA----TTC 48604
| |||||||| ||||| || | ||| | |||||| | | | | || || |||
Sbjct 2860197 CGAAGAAGGCGAGGACGTGGGAGATGAAGTAGCGCTCATCATCGTTCAG-GCGGTTGTTC 2860255
Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664
||| | || | ||| ||| |||||| | || || ||||||||||||| || ||
Sbjct 2860256 CAGTCGTGAAGGTCCTTGGACAGGTCAATCTCCTCTGCAGTCCAGAAGGAGGCCTCGGCC 2860315
Query 48665 TTTTTGTACAT 48675
|| ||||||||
Sbjct 2860316 TTCTTGTACAT 2860326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532415742720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |