Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 150 3e-31 seq1 147 4e-30 >seq2 Length=4789688 Score = 150 bits (166), Expect = 3e-31 Identities = 333/503 (66%), Gaps = 13/503 (3%) Strand=Plus/Minus Query 25824 GAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCT 25883 |||||| ||||||||| |||||||| | | || | || |||| |||| || Sbjct 2859933 GAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAGTCCACCTTTGCTCAGCGTCT 2859874 Query 25884 GGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTG 25943 || ||||| || ||||||||||||||||| ||| ||| || ||||| | |||||||| Sbjct 2859873 CGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTTGCTTCGATCTTCTG 2859814 Query 25944 GCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 ||| ||| || || ||||| || || ||| ||||||||||| ||| | || Sbjct 2859813 GCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGAGCTGATCTCTCGTGA 2859754 Query 26004 CGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063 |||||||| |||| || ||||| || ||||| | | | |||| | |||| || Sbjct 2859753 TGAGGGTCTGCACACCGACTTTGCTTGTCTGCTGTTCTC---CCACCTCAACCACCGCCC 2859697 Query 26064 TTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCN 26123 | | |||| ||| | | ||||||| || || || | ||||||| ||||||| | Sbjct 2859696 TAGCAAGGAGATTGTCCAGAACATCATCACCGACGCCGTCGCGATCGAGCAGGAGTTCCT 2859637 Query 26124 NNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACAT 26183 | ||||||||| || |||||| |||| ||||| Sbjct 2859636 GACGGATGCTCTGCCCGTCAACCTGCTTGGCATGAACGCCAAGCTCATGTGCCAGTACAT 2859577 Query 26184 TGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGA--CTCTACAGTAC 26240 |||| || || |||| || || ||| | ||| | | ||| ||||| || Sbjct 2859576 CGAGTTCGTCGCTGACCGACTTCTCGTGGCTCTTGGCA---ACAAGAAGTACTACA--AC 2859522 Query 26241 GC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTT 26298 || | || || |||||||| ||||| ||||| ||| || || |||||||||||||| Sbjct 2859521 GCCACCAATCCCTTCGACTTCATGGACAACATCTCGCTGTCCGGCAAGACCAACTTCTTC 2859462 Query 26299 GAAAAGAGGGTCGGCGACTATCA 26321 || ||| | ||||| ||||| || Sbjct 2859461 GAGAAGCGTGTCGGTGACTACCA 2859439 >seq1 Length=6618042 Score = 147 bits (162), Expect = 4e-30 Identities = 390/589 (66%), Gaps = 10/589 (2%) Strand=Plus/Plus Query 221941 GGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGG 222000 |||| ||||| | | |||| || |||||| | || | ||||| ||| | | ||| Sbjct 2615600 GGTAAAGAGCCT--CGAACTCCTCGCCGTACACATCAGCGAGGCCAGGAGCCTCGTTGGG 2615657 Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060 || | ||| |||||| ||| | | ||| | || ||||||||||||||| |||| Sbjct 2615658 GCAGAACAGTGTCCAGTCACCGTTCGCCTCGACACGCTTCATGAAGAGGTCCGGAGTCCA 2615717 Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120 || || | |||||||| | | | || ||| ||||| ||| || | ||||| Sbjct 2615718 GAGAGCGTAGAAGAGATCACGAGCTCTAACTTCTTCCTTGCCGTGGTTCTTGCGAAGATC 2615777 Query 222121 CAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCG 222180 ||| || || || || |||| |||||| |||||||| |||| || | ||| || || || Sbjct 2615778 CAAGAAGTCGAAGATATCAGAGTGCCAAGGCTCCAGGTAGATAGCGAAAGCACCAGGGCG 2615837 Query 222181 CTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGGTA 222239 |||||| || ||||| || || || | || | |||||||| || || | || | Sbjct 2615838 CTTGTTTCCTCCCTGGTCGACGTATCTGGC-AGTGTTGTTGAAGACCCGGAGCATGGGGA 2615896 Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299 | | ||||||||| || ||||| || ||||| | ||| ||| | || ||| Sbjct 2615897 CAATTCCGTTGGAAGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGC---GGATAC 2615953 Query 222300 --TGGCAGACATG-CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356 ||| | | || |||||||| ||| || ||||||| || || ||||||||| Sbjct 2615954 GGTGGATGTTGAGACCAATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAG 2616013 Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416 |||| || ||||| || ||| ||||| | || | || || || || | | || Sbjct 2616014 TGTCGTAAATACCCTCAATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCT 2616073 Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476 | | | | | || |||||| ||||| || ||| || || || ||||| | | Sbjct 2616074 GCGGCTGAGGAGTACCGGCGTTGAACAGGGTTGGAGAAGCATGAGTGAAGTACTTCTGGG 2616133 Query 222477 ACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525 ||||||| | ||||||||| | ||| | | |||| || ||||| || Sbjct 2616134 ACATCAGGTTGTACGTCTCAATGACCTTCTCAATGTCATCACCGTGGAT 2616182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844416851520