Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 6e-13 >seq9 Length=1026226 Score = 89.7 bits (98), Expect = 6e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 ||| || || ||||| ||||| || ||||||||||| ||||| || || || | | || Sbjct 606697 CATGTTGGCAAGCAGGGCTTGCGCCGTGCAGATGTTGCTGGTCGCCTTTTCACGGCGGAT 606756 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 |||||||||| || || || || | ||| ||| | ||||| | |||| || Sbjct 606757 GTGCTGCTCTCGGGTCTGCAGAGCCAGTCTCAGGGCACGGTTGCCCAGCCGGTCCTTGGA 606816 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477 || ||||| | ||| || ||||| | ||| |||||||| | |||||||| || Sbjct 606817 GATGCCGACAATGCGGCCGGGGATCTTGCGCTTGTACTTGTCGGCGCAGGCAAAGAAGGC 606876 Query 139478 AGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTG 139519 || || || ||||| | ||||| || | ||| | ||||| Sbjct 606877 GGCGTGCGGTCCTCCAAAGCCCATCGGGACACCCAGTCTTTG 606918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998161163160