Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 seq2 109 7e-19 >seq1 Length=6618042 Score = 154 bits (170), Expect = 2e-32 Identities = 412/624 (66%), Gaps = 12/624 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| | ||||| || || | || |||||||| || |||||||| ||| Sbjct 2616215 CCCCAGCACATGATTATGCGTGTTGCTGTTGGAATCCACGGTGATGACATTGAGAAGGTC 2616156 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||||||||| | ||| |||| ||| || | |||||||| || Sbjct 2616155 ATTGAGACGTACAACCTGATGTCCCAGAAGTAC-TTCACTCATGCTTCTCCAACCCTGTT 2616097 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || ||||| || |||||| | || |||||||| ||| || ||||| || Sbjct 2616096 CAACGCCGGTACTCCTCAGCCGCAGCTCGCCTCCTGCTTCCTCGTCGACATGAAGGAAGA 2616037 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | ||||| || | ||||| | | ||||||| ||||||||| ||||| Sbjct 2616036 CAGCATTGAGGGTATTTACGACACTCTCAAGACTTGTGCGCTGATCTCAAAGACCGCTGG 2615977 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | ||||||| | | | |||| || || || || || Sbjct 2615976 TGGTATTGGTCTCAACATCCACCGTATCCGCGCCACCGGCTCCTACATCTCTGGTACCAA 2615917 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || | || ||| | || ||||| || || || ||| ||| || | || || Sbjct 2615916 TGGATCTTCCAACGGAATTGTCCCCATGCTCCGGGTCTTCAACAACACTGCCAGATACGT 2615857 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGAACCATGGCA 75624 | || ||| | |||| | || | | ||| ||||| |||| || ||||| Sbjct 2615856 CGACCA---GGGAGGAAACAAGCGCCCTGGTGCTTTCGCTATCTACCTGGAGCCTTGGCA 2615800 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 | |||||| | || ||| | || | || ||||| || | ||||| | | | Sbjct 2615799 CTCTGATATCTTCGACTTCTTGGATCTTCGCAAGAACCACGGCAAGGAAGAAGTTAGAGC 2615740 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | |||||||| | | || |||| ||| ||||| ||||||||||| || |||| | Sbjct 2615739 TCGTGATCTCTTCTACGCTCTCTGGACTCCGGACCTCTTCATGAAGCGTGTCGAGGCGAA 2615680 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| | ||| | || ||||| || || |||| || || ||| | || | | || || Sbjct 2615679 CGGTGACTGGACACTGTTCTGCCCCAACGAGGCTCCTGGCCTCGCTGATGTGTACGGCGA 2615620 Query 75805 GGAGTTTGAAGCCCTCTA-CACAA 75827 |||||| || || || || ||||| Sbjct 2615619 GGAGTTCGAGGCTCTTTACCACAA 2615596 Score = 118 bits (130), Expect = 1e-21 Identities = 133/178 (75%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | || |||||| | | ||||||||||| ||||| |||| ||||| ||||||| Sbjct 2615497 TTTGGTACGCCATTCTCGAGGCGCAGACGGAGACCGGAACCCCATTCATGCTGTACAAGG 2615438 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 ||||||| |||| |||||| ||||| ||||| |||| || ||| ||||| || || | Sbjct 2615437 ATGCTTGCAACAGGAAGAGCAACCAGAAGAACCTGGGTACTATCCGCAGCTCCAACCTCT 2615378 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATC 76053 |||| || ||| | ||||| | | || ||| ||||| ||||| ||||| || Sbjct 2615377 GCACTGAGATTATCGAGTATAGCGCCCCTGACGAGGTTGCTGTCTGCAACTTGGCCTC 2615320 >seq2 Length=4789688 Score = 109 bits (120), Expect = 7e-19 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || || ||| || | |||| | || | |||| || |||| Sbjct 2859935 AAGAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAGTC-CACCTTTGCTCAGCG 2859877 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTT 65140 || |||| || || ||||||||| |||||||||||||| || || ||| | || | Sbjct 2859876 TCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTT-TGCTTCGATCT 2859818 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 ||| |||||||||| ||||| ||||| || || |||||| || || || || || | Sbjct 2859817 TCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGAGCTGATCTCTC 2859758 Query 65201 GAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | ||||||||||| ||| || ||||| Sbjct 2859757 GTGATGAGGGTCTGCACACCGACTTTGC 2859730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569353915040