Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03- 01] 33 sequences; 31,644,316 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 104 7e-17 seq1 104 7e-17 seq2 98.7 3e-15 >seq5 Length=3167764 Score = 104 bits (114), Expect = 7e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 |||||||||||||| | || || || || || ||||| ||||| |||||||| || Sbjct 1278576 TGAATATAACCAGTCTCTGCGGTCTTCACTGCAGTGTCAATGAGACCCTCACGACCAGCC 1278517 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAA 302717 ||||| |||||||| | || || ||| || || | | | | ||| | ||||| || Sbjct 1278516 ATAGCGTGGAAGAAGAATTCGGTAGG-CGTCAGACCACGGAGATACGAGTTTTCAACAAA 1278458 Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777 ||||| | ||| || || | ||| ||| || || || |||| ||| | || || | Sbjct 1278457 GCCACGAGACTCTGGAGAGTAGTCATCCTTTGTGAAATGAGGCAAGGTGCGGTACTTGAA 1278398 Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCC 302816 |||| | || |||||||| || |||||| ||||||||| Sbjct 1278397 GCCGAAAGGAATACGCTTGCCCTCAACGGACTGCTGTCC 1278359 >seq1 Length=6618042 Score = 104 bits (114), Expect = 7e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||| ||| |||| || || || ||| ||| | | |||| || || | ||||||| Sbjct 2615315 CAAGAGAGGCCAAGTTGCAGACAGCAACCTCGTCAGGGGCGCTATACTCGATAATCTCAG 2615374 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 ||| ||||| || || ||| || || | ||||||||||| || ||||| |||| Sbjct 2615375 TGCAGAGGTTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAAG 2615434 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT 155758 |||||||||| || ||| |||||||||| |||||| |||| || || ||||| Sbjct 2615435 CATCCTTGTACAGCATGAATGGGGTTCCGGTCTCCGTCTGCGCCTCGAGAAT 2615486 >seq2 Length=4789688 Score = 98.7 bits (108), Expect = 3e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 ||||||| || ||||| |||| ||||| || || ||||| ||||||||| | | Sbjct 2859949 TTCCTTGCATCCGCAAGAAGGCTGAGTGGGCCATCAAGTGGATTCAGGACAAGGAGTCCA 2859890 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 |||||| ||||||||||| || || | || |||||||| || ||| || | | Sbjct 2859889 CCTTTGCTCAGCGTCTCGTTGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCT 2859830 Query 133557 TCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615 | ||| || || || ||||| || ||||||||| | | ||||| || || || ||| Sbjct 2859829 T-TGCTTCGATCTTCTGGCTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAAC 2859771 Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 || || || || | || |||| || |||||||| ||||| Sbjct 2859770 GAGCTGATCTCTCGTGATGAGGGTCTGCACACCGACTTTGC 2859730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816977697121