Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 5e-26
seq1 132 6e-25
seq6 87.8 2e-11
>seq2
Length=4789688
Score = 136 bits (150), Expect = 5e-26
Identities = 227/323 (70%), Gaps = 9/323 (3%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| ||||||||
Sbjct 2859433 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGACAGCGAGATG 2859492
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||| | ||| || |||| | ||||||| ||| | | || || | | ||
Sbjct 2859493 TTGTCCATGAAGTCGAAGGGATTGGTGGCGTTGTAGTACTTCTTGTTGCCAAGAGCCACG 2859552
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| || ||||| ||||| ||||||||||||||||||||||| |||||||||||| |
Sbjct 2859553 AGAAGTCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGC 2859612
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || ||||| | || ||| ||||| | ||||||| ||||||| ||| ||||
Sbjct 2859613 AGGTTGACGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGCGTCGGTGATG 2859672
Query 868931 ATCTGCCTGGGCA--CGTCGGCCGAGGGC--TTGTTGACGAGCATCGTGTAGAGCAGGCA 868986
|| | |||| || | | | ||||| | ||||| | | | | | ||||| ||
Sbjct 2859673 ATGT-TCTGGACAATCTCCTTGCTAGGGCGGTGGTTGAGGTG---GGAGAACAGCAGACA 2859728
Query 868987 GGCAAAGTCGCAGTGCA-ACCCT 869008
||||||||| ||||| |||||
Sbjct 2859729 AGCAAAGTCGGTGTGCAGACCCT 2859751
Score = 118 bits (130), Expect = 1e-20
Identities = 178/251 (71%), Gaps = 3/251 (1%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || ||||||||| || || ||| | |||| | || |||
Sbjct 2860082 GAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCGGGGACCTGG 2860141
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
|||||| |||| || | ||||||| ||| ||||| |||||| ||||||||
Sbjct 2860142 ACCTCCCCGCTGAAGCGCTCCACCAGGTTTTCGTTGACGATTCCGTCGGACGCGGCGAAG 2860201
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809
|| || |||||||| ||| |||| |||||| || ||| | | ||| ||||| |
Sbjct 2860202 AAGGCGAGGACGTGGGAGATGAAGTAGCGCTCATCATCGTTCAGGCGGTTGTTCCAGTCG 2860261
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
||| | ||||| | |||||| || ||||||| |||||||||||||| |||
Sbjct 2860262 TGAAGGTCCTTGGACAGGTCAATCTCCTCTGCAGTCCAGAAGGAGGCCTCGGCCTTCTTG 2860321
Query 869870 TACATCTCCCA 869880
||||||| |||
Sbjct 2860322 TACATCTGCCA 2860332
Score = 111 bits (122), Expect = 2e-18
Identities = 146/196 (74%), Gaps = 11/196 (6%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| || || ||| ||||| |||||| |||| ||| || ||||| || || |||||
Sbjct 2859747 ACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGACCACGCTT 2859806
Query 869239 CTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297
||| ||||| ||||| | ||| || ||| ||||| ||||||||||| || ||||| |
Sbjct 2859807 CTTCAGCCAGAAGATCGAAGCA-AAGGAGCCGGAGAAGAAGATGCCCTCCACAGCGGCGA 2859865
Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT--TG-ATCCACTTCATCG 869354
|| | | ||| |||| ||||||||| || |||||||| || |||||||| || |
Sbjct 2859866 AGGCAACGAGACGCTGAGCAAAGGTG--GA----CTCCTTGTCCTGAATCCACTTGATGG 2859919
Query 869355 CCCAGTCGGCCTTTTT 869370
|||| || ||||| ||
Sbjct 2859920 CCCACTCAGCCTTCTT 2859935
>seq1
Length=6618042
Score = 132 bits (146), Expect = 6e-25
Identities = 184/258 (71%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||||||||| | || |||| ||| ||||| ||||||||||| || | ||||||||
Sbjct 2615850 CTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGGACAATTCCGTTGGA 2615909
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|| ||||| || | | ||||| ||||| |||||| | ||| | | ||
Sbjct 2615910 AGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGGTGGATGTTGAGACC 2615969
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || || || | ||| ||||| ||||| || ||||| |||||||| || |||||
Sbjct 2615970 AATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTGTCGTAAATACCCTC 2616029
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||| |||||||||| ||||| ||||| || | | ||||| || | || ||
Sbjct 2616030 AATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCTGCGGCTGAGGAGTACC 2616089
Query 1630305 GGCGTTGAAGAGCGTGGG 1630322
||||||||| || || ||
Sbjct 2616090 GGCGTTGAACAGGGTTGG 2616107
Score = 118 bits (130), Expect = 1e-20
Identities = 128/167 (77%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 1592131 GTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCG 1592189
||||||| || |||| ||| | || || ||| | || || || | || || ||||
Sbjct 3604712 GTGGGACCAGAAGTTCATGC-AGGTTGACCAGGAGATGCTGTTCGAAATCATTCTGGCCG 3604654
Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249
|||||||||| || |||||| | || || || | || |||||| | || || |||||||
Sbjct 3604653 CCAACTACCTTGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTTGCGAACATGA 3604594
Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||||| ||||||||||| |||||||| || |||||| ||
Sbjct 3604593 TCAAGGGCAAGTCCCCCGAGGAGATTCGCAAGACTTTCAACATCCAG 3604547
Score = 91.5 bits (100), Expect = 2e-12
Identities = 108/145 (74%), Gaps = 1/145 (1%)
Strand=Plus/Minus
Query 19041 CAAGA-GGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCT 19099
||||| ||||||||| || || || ||||| ||||| | || || || | || |
Sbjct 2912017 CAAGAAGGACAGCATTGGAGGAACTGTGACCTGCGTTATAAGGAATGTTCCTGTTGGATT 2911958
Query 19100 CGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCC 19159
|||||||| ||||| || ||| | || ||| ||| ||||| |||||||| || ||
Sbjct 2911957 GGGCGAGCCTTGCTTCGATAAGCTTGAAGCCAAGCTGGCCCATGCCATGCTCAGCATTCC 2911898
Query 19160 GGCCACCAAGGGATTCGAGATTGGC 19184
||||||||| ||||||||||| |||
Sbjct 2911897 GGCCACCAAAGGATTCGAGATCGGC 2911873
>seq6
Length=3125892
Score = 87.8 bits (96), Expect = 2e-11
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 450787 CGCGTTTGGCCGATGCGGTGCACGCGGTCGACGGCCTGCGCCTCGGCAAACGGATTGTAG 450846
||||| ||||| | |||||||||||||| ||||||||||| | || ||| |||||
Sbjct 642459 CGCGTCTGGCCCAGACGGTGCACGCGGTCCACGGCCTGCGCGACCGCTGCCGGGTTGTAC 642400
Query 450847 TGCGCGTCCATGAGCAGCACATAGTTGGCGCACACGAGGTTGAGGCCGACGCTGCCCACG 450906
|||| ||||||| || | |||| ||||||||||||||||| ||| ||
Sbjct 642399 TGCGGCTCCATGACGTAAACCTTCGAGGCGGCGGTGAGGTTGAGGCCGACGCCGCCGGCG 642340
Query 450907 CCGATGGTCATCAGGAGG 450924
|||||||| |||||||
Sbjct 642339 CCGATGGTGGCCAGGAGG 642322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107136491865461
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |