Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq8 98.7 8e-16
seq7 86.0 5e-12
>seq8
Length=1356063
Score = 98.7 bits (108), Expect = 8e-16
Identities = 184/270 (68%), Gaps = 8/270 (3%)
Strand=Plus/Plus
Query 34345 CACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGG 34404
|||| |||||||||| |||||| ||||| || |||||| | ||| || || |||
Sbjct 449630 CACAGCACAAACTTGGCGATGAATCCATCGAGGTAGTCCTGAAGCTTGGGGGCATCATGG 449689
Query 34405 GAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGC----GCGCCCAG 34460
| ||||||| || | || |||| | | | |||||| || || |||||
Sbjct 449690 GCACCGTTGATAATCCAGCGGTCGTCGGT----TGGCTTTGCGTTGGCCTGTGCACCCAG 449745
Query 34461 CTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTC 34520
||| | ||||||||||| || ||| | || || | || | || ||| ||
Sbjct 449746 CTCAAAACCGAAGTACTTGATCACGTACGCTGGAGGCCGGCTGAGAGACTGGGCAATCGA 449805
Query 34521 GGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGAT 34580
| || |||||||| ||| ||||||||||| |||||||| ||||||| ||||| |||
Sbjct 449806 GTTCAGGTTGACGACGACGGTCTTGATGCCATTGCCCTTGCCTTCGATCTTGGACTGGAT 449865
Query 34581 GCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610
| ||| ||||| |||||||| | |||
Sbjct 449866 CTTCTCCATCTTGTAACGGTAGAAGGGGTC 449895
>seq7
Length=1958609
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGGAGCCTG 110330
|||||| || || ||||| || | ||||| || ||||||||| ||||| || | | |
Sbjct 430937 AATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATTACCCTCGAAGTCGAATCGTC 430878
Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390
| ||||| ||| | || || ||| || ||||| || || | ||| ||| |
Sbjct 430877 A-GATACCATCGATAACGTGAAGTCGAAAATCCAGGACAAGGAGGGTATTCCCCCGGACC 430819
Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450
| || | ||||| | || ||||| ||||||||||||| | | || || | || ||||
Sbjct 430818 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCAGACTACA 430759
Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
| ||||| || || ||||| ||||| | || | | ||||| || ||||
Sbjct 430758 ATATTCAGAAGGAGTCTACACTGCACCTTGTCCTCCGCCTGCGTGGAGGAA 430708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841433960269
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |