Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2 127 3e-23
seq1 122 1e-21
>seq2
Length=4789688
Score = 127 bits (140), Expect = 3e-23
Identities = 178/250 (71%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| |
Sbjct 2859425 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGACA 2859484
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||||| ||||| | ||| || |||| | ||||| ||||| | || |
Sbjct 2859485 GCGAGATGTTGTCCATGAAGTCGAAGGGATTGGTGGCGTTGTAGTACTTCTTGTTGCCAA 2859544
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | || || ||||| |||||||| || ||||||||||||||||| ||||||||
Sbjct 2859545 GAGCCACGAGAAGTCGGTCAGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCA 2859604
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||| | || |||||||| | || | | ||||| | ||||||| ||||||| |
Sbjct 2859605 TGCCAAGCAGGTTGACGGGCAGAGCATCCGTCAGGAACTCCTGCTCGATCGCGACGGCGT 2859664
Query 794131 CGATGATGAT 794140
|| |||||||
Sbjct 2859665 CGGTGATGAT 2859674
Score = 104 bits (114), Expect = 4e-16
Identities = 141/195 (72%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| || || ||| ||||| |||||| ||| ||| || ||||| || || |||||
Sbjct 2859747 ACCCTCATCACGAGAGATCAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGACCACGCTT 2859806
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||| ||||| ||||| | | || ||| ||||| ||||||||||| || ||||| ||
Sbjct 2859807 CTTCAGCCAGAAGATCGAAGCAAAGGAGCCGGAGAAGAAGATGCCCTCCACAGCGGCGAA 2859866
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT--TG-ATCCACTTCATCGC 794516
| | ||||| |||| ||||| || | ||| |||| || |||||||| || ||
Sbjct 2859867 GGCAACGAGACGCTGAGCAAAGGT------GGACTCCTTGTCCTGAATCCACTTGATGGC 2859920
Query 794517 CCACTCTGCCTTTTT 794531
|||||| ||||| ||
Sbjct 2859921 CCACTCAGCCTTCTT 2859935
Score = 91.5 bits (100), Expect = 2e-12
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643
|| ||||||| ||||||||| ||||| || ||||||||||| ||||||||||| || ||
Sbjct 2860040 GGCTCCTTGATGTAGGTGTCAATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATC 2860099
Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666
||||||||| ||||| |||||
Sbjct 2860100 ATGATCTGGAAACCATAGAAGCA 2860122
>seq1
Length=6618042
Score = 122 bits (134), Expect = 1e-21
Identities = 97/117 (83%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 2035641 ATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTG 2035700
|| || |||||||||||||| || |||||| ||||||| || | || |||||||||||
Sbjct 3604663 ATTCTGGCCGCCAACTACCTTGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTT 3604604
Query 2035701 GCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757
|| ||| | |||||||||||||| |||||||| || |||||||| || |||||| ||
Sbjct 3604603 GCGAACATGATCAAGGGCAAGTCCCCCGAGGAGATTCGCAAGACTTTCAACATCCAG 3604547
Score = 105 bits (116), Expect = 1e-16
Identities = 178/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||||||||| || | || |||| ||| ||||| ||||||||||| |||| ||||||||
Sbjct 2615850 CTGGTCGACGTATCTGGCAGTGTTGTTGAAGACCCGGAGCATGGGGACAATTCCGTTGGA 2615909
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|| ||||| || | | ||||| ||| | |||||| | ||| | | ||
Sbjct 2615910 AGATCCATTGGTACCAGAGATGTAGGAGCCGGTGGCGCGGATACGGTGGATGTTGAGACC 2615969
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || || | ||| ||||| ||||| || | || || || ||||| || |||||
Sbjct 2615970 AATACCACCAGCGGTCTTTGAGATCAGCGCACAAGTCTTGAGAGTGTCGTAAATACCCTC 2616029
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | || ||||| || | | ||||| | | || ||
Sbjct 2616030 AATGCTGTCTTCCTTCATGTCGACGAGGAAGCAGGAGGCGAGCTGCGGCTGAGGAGTACC 2616089
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||| ||||| || || ||
Sbjct 2616090 GGCGTTGAACAGGGTTGG 2616107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916242889639487
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |