Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thermoascus_20crustaceus_20[genbank_20GCA_5F001599835.1_202016-03-
01] 33 sequences; 31,644,316 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq7 134 9e-27
seq1 100 2e-16
seq3 95.1 8e-15
>seq7
Length=1958609
Score = 134 bits (148), Expect = 9e-27
Identities = 160/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || | || | |||||| ||||| | |||||||||||||| ||||||||||| |
Sbjct 430936 TTCCACCACGCAGACGCAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTATAGTCGG 430995
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| ||| |||| |||| || || ||||| || ||||||||||| || ||||||||| | |
Sbjct 430996 AAAGGGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAGATCAGGCGCTGCTGGTCTGGGG 431055
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | ||||||||||| | || || |||||| | || | || | | ||| |
Sbjct 431056 GGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCA 431115
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | ||| || ||||| || ||||||||||| ||
Sbjct 431116 CCTCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGAC 431152
Score = 125 bits (138), Expect = 5e-24
Identities = 168/233 (72%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
||||||| | || | ||||| ||||| | || |||||||||||| || ||||| |
Sbjct 430708 TTCCTCCACGCAGGCGGAGGACAAGGTGCAGTGTAGACTCCTTCTGAATATTGTAGTCTG 430767
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| | | |||| |||| ||||| ||||| || |||||||| || || |||||||| | |
Sbjct 430768 ACAAGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCCGGGG 430827
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCC 34924
| | ||||||||||| | ||||| || || | ||||||| || |
Sbjct 430828 GAATACCCTCCTTGTCCTGGATTTTCGACTTCAC----GTTATCGATGGTATCTGACGAT 430883
Query 34925 TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || | ||| ||||||||||| ||||||||||| || || ||||||||
Sbjct 430884 TCGACTTCGAGGGTAATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCAT 430936
Score = 122 bits (134), Expect = 6e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| || |||||||| | |||||||||||||| || || ||||| || || |||| |
Sbjct 430494 CTGAGAACCAGGTGGAGAGTGCTCTCCTTCTGGATATTGTAGTCGGAGAGCGTGCGACCG 430553
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| || || ||||| || |||||||||| || ||||||||| | || | |||||||||
Sbjct 430554 TCCTCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATACCCTCCTTG 430613
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || ||| | || | ||| | |||||| || | || |||
Sbjct 430614 TCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCAGAGCTCTCGACCTCCAGCGTAATG 430673
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| || || ||||| || |||||||||||
Sbjct 430674 GTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 430708
Score = 105 bits (116), Expect = 4e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||||| |||| ||||||||| ||||||||||| || || |||| | ||
Sbjct 431238 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGCGTGCGACCGTCC 431297
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||||| || ||||||||| | || | |||||||||||
Sbjct 431298 TCAAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 431357
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | | ||| || |||| ||| || |||
Sbjct 431358 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTC 431417
Query 34946 TTTCCCGT 34953
|| || ||
Sbjct 431418 TTGCCGGT 431425
>seq1
Length=6618042
Score = 100 bits (110), Expect = 2e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||||||| | ||| ||||||||| ||||| || ||||| ||| |||| | ||
Sbjct 1741407 CAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGGCCGTC 1741348
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 1741347 CTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 1741288
>seq3
Length=4355815
Score = 95.1 bits (104), Expect = 8e-15
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| || |||| |||| || || ||||| || |||||||
Sbjct 2043491 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 2043550
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
| || || |||||||| | || | ||||||||||| | || || ||||||
Sbjct 2043551 TAAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT 2043610
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | || | | |||||| || | ||| |||||||| ||||| |||||||| || |
Sbjct 2043611 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2043670
Query 34968 AG 34969
||
Sbjct 2043671 AG 2043672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692669010427
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |